- Author: Ben Faber
Citrus greening disease, or Huanglongbing (HLB), is deadly, incurable, and the most significant threat to the citrus industry. Most HLB research focuses on the tree canopy, but scientists in California studied the impact of HLB on root systems. They recently published the first study to report on the response of two different varieties of citrus to the causal bacterium, 'Candidatus Liberibacter asiaticus' using metabolomics and microbiome technologies.
"Metabolomics is a cutting-edge field of study that provides snapshot information about the metabolism of living things," explains author Emily M. T. Padhi, "while microbiome studies provide valuable information about the microbial communities living in a particular ecological niche - some microbes are beneficial to the host, while others can be harmful."
Padhi and colleagues wanted to see how the root system of two varieties of citrus responded to HLB. They collected roots from healthy and infected Lisbon lemon and Washington Navel orange trees grown in greenhouses at the same time and under the same conditions.
They found that both varieties experienced a reduction in root sugars and amino acids when exposed to HLB. However, they also found differences. While the concentration of malic acid and quinic acid (two metabolites involved in plant defense) increased in the navel roots, they decreased in the lemon roots. They also found that the beneficial bacteria Burkholderia increased substantially in navel plants but not in lemons, which contradicts previous studies.
"Overall, this is the first study to compare two varieties of citrus using a combined metabolomics and microbiome approach and demonstrates that scion influences root microbial community composition and, to a lesser extent, the root metabolome."
There is evidence to suggest that the causal bacterium moves to the root system soon after a plant becomes infected. A key strategy for preserving the health of an infected tree is root system management and research on different responses to HLB may help devise new variety-specific preventative and treatment measures.
MAGE: Images of the bulk root mass and sample leaves from healthy and 'Candidatus Liberibacter asiaticus' lemon and navel plants.
Credit: Emily M. T. Padhi, Nilesh Maharaj, Shin-Yi Lin, Darya O. Mishchuk, Elizabeth Chin, Kris Godfrey, Elizabeth Foster, Marylou Polek, Johan H. J. Leveau, and Carolyn M. Slupsky
- Author: Ben Faber
UC IPM revised the weeds, nematodes, plant growth regulators, and diseases sections of the Citrus Pest Management Guidelines! Learn how to manage diseases like anthracnose, bacterial blast, bot gummosis, brown rot, dry root rot, phytophthora gummosis and many more! Check out the new huanglongbing and hyphoderma gummosis sections. Learn also how to increase fruit set & size and reduce fruit drop using the updated section on plant growth regulators. Citrus Pest Management Guidelines (PMG)
These guides can be especially helpful when trying to compare symptoms on fruit or leaves at different stages of plant growth when trying to figure out what the problem might be. For example, under the "Year-Round IPM Program", you want to know what is causing is causing scarring on fruit during fruit development. So you go to "Fruit Development", and scroll down to "Look for other pests and their damage to fruit", and boom, there's the page comparing damage to fruit by different insects. Or you want to see disease symptoms, go to "Look for diseases that cause symptoms on fruit". Yeah!!!
In addition, we've launched the entire Pest Management Guidelines in our new, mobile-friendly format
- Author: Ben Faber
What Are the UC Ag Experts Talking About?
Join the online crowd
February 19, 2020
Pesticide Resistance Management of Citrus Pests
Dr. Elizabeth Grafton-Cardwell will talk about how insects develop resistance (including examples of resistance in citrus thrips, California red scale, and citricola scale), pesticide use tactics to avoid resistance, the potential for resistance in Asian citrus psyllid, and best practices for citrus pest management. One hour of DPR continuing education unit is approved.
webinar registration at Pesticide Webinar
This presentation is part of the series of 1-hour webinars, designed for growers and Pest Control Advisers, highlighting various pest management and horticultural topics for citrus and avocados. During each session, a UC Expert on the subject will make a presentation and entertain write-in questions via chat during and/or after the presentation. As we develop this program, we may expand to other crops.
Upcoming topics:
- Gibbing in Avocados (Ben Faber, March 2020)
- Citricola scale by Elizabeth Grafton-Cardwell (April 2020)
- Invasive shot hole borers in avocado by Akif Eskalen (May 2020)
- Vertebrate pests by Roger Baldwin (June 2020)
- Ants in citrus by Mark Hoddle (July 2020)
- Use of plant growth regulators on citrus by Ashraf El-kereamy (August 2020)
- Author: Ben Faber
Citrus greening disease, or Huanglongbing (HLB), is deadly, incurable, and the most significant threat to the citrus industry. Most HLB research focuses on the tree canopy, but scientists in California studied the impact of HLB on root systems. They recently published the first study to report on the response of two different varieties of citrus to the causal bacterium, 'Candidatus Liberibacter asiaticus' using metabolomics and microbiome technologies.
"Metabolomics is a cutting-edge field of study that provides snapshot information about the metabolism of living things," explains author Emily M. T. Padhi, "while microbiome studies provide valuable information about the microbial communities living in a particular ecological niche - some microbes are beneficial to the host, while others can be harmful."
Padhi and colleagues wanted to see how the root system of two varieties of citrus responded to HLB. They collected roots from healthy and infected Lisbon lemon and Washington Navel orange trees grown in greenhouses at the same time and under the same conditions.
They found that both varieties experienced a reduction in root sugars and amino acids when exposed to HLB. However, they also found differences. While the concentration of malic acid and quinic acid (two metabolites involved in plant defense) increased in the navel roots, they decreased in the lemon roots. They also found that the beneficial bacteria Burkholderia increased substantially in navel plants but not in lemons, which contradicts previous studies.
"Overall, this is the first study to compare two varieties of citrus using a combined metabolomics and microbiome approach and demonstrates that scion influences root microbial community composition and, to a lesser extent, the root metabolome."
There is evidence to suggest that the causal bacterium moves to the root system soon after a plant becomes infected. A key strategy for preserving the health of an infected tree is root system management and research on different responses to HLB may help devise new variety-specific preventative and treatment measures.
Emily M. T. Padhi Nilesh Maharaj Shin-Yi Lin Darya O. Mishchuk Elizabeth Chin Kris Godfrey Elizabeth Foster Marylou Polek Johan H. J. Leveau and Carolyn M. Slupsky
https://apsjournals.apsnet.org/doi/10.1094/PHYTO-03-19-0103-R
Images of the bulk root mass and sample leaves from healthy and 'Candidatus Liberibacter asiaticus' lemon and navel plants.
Credit: Emily M. T. Padhi, Nilesh Maharaj, Shin-Yi Lin, Darya O. Mishchuk, Elizabeth Chin, Kris Godfrey, Elizabeth Foster, Marylou Polek, Johan H. J. Leveau, and Carolyn M. Slupsky
/h4>- Author: Ben Faber
Several calls have come in from growers lately about yellow avocado and citrus trees. the yellowing is most common on the late summer flush leaves or can affect the whole canopy on young trees. In severe cases leaves fall. This happens going into winter after a warm fall when growing conditions are good. During the winter, the root systems become depleted of stored starch and die.
During winter, trees go into what is called a “quiescent” state, a version of dormancy found in subtropical tree crops. This is a resting mode that protects them to a certain degree from frost damage. There is not much that can be done in a field setting until temperatures warm up and the trees begin growing again in late winter/early spring. As the temperatures increase, the trees gradually recover and the foliage re-greens.
Winter Yellows can be exacerbated in years when we do not have leaching rains to remove salts from the root zone. And it can also be more severe when we have those years when winter rains just never seem to stop and rootzones become waterlogged. We may never see that time again.
Photo by Greg Moulds