- Author: Kathy Keatley Garvey
Meet Salil Bidaye, Research Group Leader, Max Planck Florida Institute for Neuroscience, Jupiter, Fla.
He studies neuronal control locomotion in fruit flies, Drosophila--focusing his research on "understanding how fast and precise locomotor decisions are executed at the level of genetically defined neural circuits."
He will present his seminar, hosted by the UC Davis Department of Entomology and Nematology (ENT), at 4:10 p.m., Monday, March 4 in 122 Briggs Hall and on Zoom. The Zoom link:
https://ucdavis.zoom.us/j/95882849672.
Molecular geneticist and physiologist Joanna Chiu, professor and chair of the ENT department, will introduce him.
"Walking is a complex motor program involving coordinated and distributed activity across the brain and the spinal cord," Bidaye writes in his abstract. "Halting appropriately at the correct time is a critical but often overlooked component of walking control. While recent studies have delineated specific genetically defined neuronal populations in the mouse brainstem that drive different types of halting, the underlying neural circuit mechanisms responsible for overruling the competing walking-state neural activity to generate context-appropriate halting, remain unclear. Here, we elucidate two fundamental mechanisms by which I implement context-appropriate halting."
Bidaye accepted his Research Group Leader position at the Max Planck Florida Institute for Neuroscience in April 2021. He previously served as a postdoctoral Fellow at UC Berkeley in the lab of Professor Kristin Scott. He obtained his Ph.D. at the Research Institute of Molecular Pathology, Vienna, Austria, working in the Barry Dickson laboratory.
While a graduate student in Vienna, "I observed fruit-flies chasing each other during courtship," he relates. "I got hooked on to the intricate control that comprises insect walking. "This fascination kindled by powerful fly genetic tools, has led me to persistently device new behavioral assays and neural recording techniques, aimed at elucidating the fundamental control mechanisms that underlie the exquisite locomotor control that is commonplace in all animals."
His publications include:
- Two Brain Pathways Initiate Distinct Forward Walking Programs in Drosophila, Aug. 20, 2020, journal Neuron
- Six-Legged Walking in Insects: How CPGs, Peripheral Feedback, and Descending Signals Generate Coordinated and Adaptive Motor Rhythms, February 2018, Journal of Neurophysiology
- Neuronal Control of Drosophila Walking Direction, April 4, 2014, Science
Bidaye's seminar is expected to be the last of the winter quarter; the next scheduled speaker, Inga Zasada, a research plant pathologist with the USDA-ARS Horticultural Crops Research Laboratory, Corvallis, Ore., recently canceled her March 11 seminar due to a medical issue in the family.
For any Zoom technical issues, contact seminar coordinator Brian Johnson, associate professor, at brnjohnson@ucdavis.edu. The list of winter quarter seminars is here.
/span>- Author: Kathy Keatley Garvey
That's the title of the Jan. 22nd seminar hosted by the UC Davis Department of Entomology and Nematology and presented by William Ja, associate professor, Herbert Wertheim Scripps UF Institute for Biomedical Innovation and Technology in Jupiter, Florida.
The seminar is at 4:10 p.m., in 122 Briggs Hall. It also will be on Zoom. The Zoom link:
https://ucdavis.zoom.us/j/95882849672.
"The Ja lab uses the fruit fly, Drosophila melanogaster, as a model organism for uncovering the genetic and neuronal mechanisms that drive aging, behavior, and disease," Ja says in his abstract. "Recently developed tools allow us to track fly feeding behavior with unparalleled resolution. These tools facilitate the identification of genes and circuits that regulate food intake at diverse time scales, including studies of: 1) meal intake; 2) daily (circadian) feeding rhythms; and 3) compensatory feeding in response to high or low quality food. Our studies of feeding behavior and nutrition also inform aging interventions, including a novel caloric restriction paradigm and an intermittent fasting regime that extends fly life through the stimulation of circadian-regulated autophagy. Overall, our fly studies shed light on basic neurobiological principles that drive animal behavior, providing insights that potentially inform the development of conserved therapeutic strategies."
Ja received his chemistry degree at UC Berkeley, working with Richard Mathies and Alex Glazer on DNA sequencing technologies. He pursued doctoral studies at the California Institute of Technology with Rich Roberts, utilizing mRNA display technology to identify modulators of G protein signaling. Ja remained at Cal Tech as a postdoctoral scholar to work with Seymour Benzer on developing longevity ‘drugs' in Drosophila. His laboratory focuses on aging and nutrition, animal behavior, and host-microbiome interactions.
Seminar coordinator is Brian Johnson, associate professor, UC Davis Department of Entomology and Nematology. For Zoom technical issues, he may be reached at brnjohnson@ucdavis.edu. More information on the seminars is here
- Author: Kathy Keatley Garvey
So says molecular biologist Wanhe Li, an assistant professor at Texas A&M and a Cancer Prevention and Research Institute of Texas (CPRIT) Scholar, who will present a seminar, hosted by the UC Davis Department of Entomology and Nematology, on Wednesday, Nov. 2
Li will discuss "How Time Flies During Lockdown?--Mechanisms Underlying Chronic Social Isolation-induced Sleep Loss in Drosophila" at her in-person and virtual seminar at 4:10 p.m., in 122 Briggs Hall. The Zoom link: https://ucdavis.zoom.us/j/95882849672.
Introducing her will be molecular geneticist and physiologist Joanna Chiu, professor and vice chair of the UC Davis Department of Entomology and Nematology.
"Chronic social isolation and loneliness have profound impacts on public health," Li says in her abstract. "Though experimental manipulations are widely applied to studying sleep/wakefulness and circadian regulation in animal models, how normal sleep is perturbed by social isolation and chronic stress is largely unknown. We previously reported that chronically isolated animals exhibit sleep-loss accompanied by over-consumption of food. The observed behavioral changes induced by chronic social isolation stress is linked to neural activities in specific neural circuits in the Drosophila brain."
"These results," she continued, "resonate with anecdotal findings of loneliness-associated sleep difficulties and hyperphagia in humans, and present a mechanistic link between chronic social isolation, metabolism, and sleep, addressing a long-standing call for animal models focused on loneliness. Future work built upon this model will help us understand the perception of social isolation and other emotional states, the regulation of sleep/wakefulness, and the regulation of metabolism at the intersection of genetics, biological timing, and neurobiology."
Science Daily, in its Aug. 18, 2021 edition, reported on her research (co-authored by eight colleagues): "COVID-19 lockdowns scrambled sleep schedules and stretched waistlines. One culprit may be social isolation itself. Scientists have found that lone fruit flies quarantined in test tubes sleep too little and eat too much after only about one week of social isolation, according to a new study published in Nature. The findings, which describe how chronic separation from the group leads to changes in gene expression, neural activity, and behavior in flies, provide one of the first robust animal models for studying the body's biological reaction to loneliness."
Li, who holds a bachelor's degree in biological sciences (2004) from Nankai University, Tianjin, China, received her doctorate in molecular and cellular biology from Stony Brook University in 2011 through a joint program with Cold Spring Harbor Laboratory, Laurel Hollow, N.Y. She served as a postdoctoral associate and research associate,The Rockefeller University, New York City.
Some of her latest publications:
- Li, W, Keene, AC. Flies sense the world while sleeping. Nature. 2021;598 (7881):423-424. doi: 10.1038/d41586-021-02441-6. PubMed PMID:34588643 .
- Li, W, Wang, Z, Syed, S, Lyu, C, Lincoln, S, O'Neil, J et al.. Chronic social isolation signals starvation and reduces sleep in Drosophila. Nature. 2021;597 (7875):239-244. doi: 10.1038/s41586-021-03837-0. PubMed PMID:34408325 PubMed Central PMC8429171.
- Ahmad, M, Li, W, Top, D. Integration of Circadian Clock Information in the Drosophila Circadian Neuronal Network. Journal of Biological Rhythms. 2021;36 (3):203-220. doi: 10.1177/0748730421993953. PubMed PMID:33641476 PubMed Central PMC8114447.
- Garaulet, DL, Sun, K, Li, W, Wen, J, Panzarino, AM, O'Neil, JL et al.. miR-124 Regulates Diverse Aspects of Rhythmic Behavior in Drosophila. Journal of Neuroscience, 2016;36 (12):3414-21. doi: 10.1523/JNEUROSCI.3287-15.2016. PubMed PMID:27013671 PubMed Central PMC4804003.
- Shuai, Y, Hirokawa, A, Ai, Y, Zhang, M, Li, W, Zhong, Y et al.. Dissecting neural pathways for forgetting in Drosophila olfactory aversive memory. Proceedings of the National Academy of Sciences U S A. 2015;112 (48):E6663-72. doi: 10.1073/pnas.1512792112. PubMed PMID:26627257 PubMed Central PMC4672816.
Emily Meineke, assistant professor of urban landscape entomology, UC Davis Department of Entomology and Nematology, coordinates the department's seminars for the 2022-23 academic year. All 11 seminars will take place both person and virtually at 4:10 p.m. on Wednesdays in Room 122 of Briggs Hall except for the Nov. 9th and Dec. 7th seminars, which will be virtual only, she said. (See list of seminars)
For further information on the seminars or to resolve any technical difficulties with Zoom, contact Meineke at ekmeineke@ucdavis.edu.
- Author: Kathy Keatley Garvey
That was molecular geneticist Yao Cai, entertaining with several other members of the UC Davis Entomology Graduate Student Association (EGSA). He was dressed--quite appropriately, too--as a fruit fly, Drosophila melanogaster, which he described as “our favorite model organism in Insecta!” (See Bug Squad blog.)
Entomology Today, a publication of the Entomological Society of America, picked up the story, headlining it as "Bugs and Beats."
Now fast forward...past the two-year pandemic...and way over to 2022. Time flies, right?
Cai now holds a doctorate in entomology (as of September) and will present his exit seminar, "How Do Flies Tell the Time of Day?" at the next UC Davis Department of Entomology and Nematology seminar, set Wednesday, Oct. 26.
He will deliver his seminar both in-person and virtually at 4:10 p.m. in 122 Briggs Hall. The Zoom link:
https://ucdavis.zoom.us/j/95882849672.
Cai will be introduced by his major professor, molecular geneticist and physiologist Joanna Chiu, professor and vice chair of the department.
"This study highlights the importance of post-translational regulation of circadian rhythms," Cao noted. "Finally, together with previous studies in fungi and mammals, our results suggest a conserved feature in eukaryotic clocks by which transcriptional repressors recruit CK1s to modulate the activity of transcription activators."
A native of southeast Asia, Cai holds two degrees from China Agricultural University, Beijing: a bachelor of science degree (2014) in plant protection and a master's degree in entomology (2016).
What sparked his interest in entomology? "The insect world presented to me the diversity of species when I was a kid," he related. "Since then, I have wondered about the origin and evolution of species. I was lucky to cultivate my interest as an undergrad and then a master student in Chinese Agricultural University. As a PhD student in the Department of Entomology andNematology at UC Davis, this interest expanded to the cellular and molecular mechanisms of evolution and adaptation. Upon my graduation in summer 2022, I continued my postdoctoral research in the Chiu lab. I hope this will prepare me to become a professor in biological sciences."
Cai completed an International Chronobiology Summer School (virtual) in 2020 and a UC Davis Comprehensive Course in Flow Cytometry in 2019. His publications include:
- Cai YD*, Joshi R*, Xia Y, Chiu JC, Emery P (2022) PERIOD phosphoclusters control temperature compensation of the Drosophila circadian clock, Frontiers in Physiology. 13: 888262.
- Cai YD, Sotelo SH, Jackson K, Chiu JC (2022) Assaying circadian locomotor activity rhythm in Drosophila, in “Circadian Rhythms” in NeuroMethods series. ed. M. Hatori, T. Hirota, and S. Panda. Springer Nature, Switzerland.
-
Cai Y.D., Y. Xue, C. Truong, J. Del-Carmen Li, C. Ochoa, J.T. Vanselow, K.A. Murphy, Y.H. Li, X. Liu, B.L. Kunimoto, H. Zheng, C. Zhao, Y. Zhang, A. Schlosser, J.C. Chiu (2021). CK2 inhibits TIMELESS nuclear export and modulates CLOCK transcriptional activity to regulate circadian rhythms. Current Biology 31(3): 502-514.
- Cai, Y.D., J.C. Chiu (2021). Timeless in animal circadian clocks and beyond. FEBS Journal (Online ahead of print). doi: 10.1111/febs.16253.
-
Abrieux, A., Y. Xue, Y. Cai, K.M. Lewald, H.N. Nguyen, Y. Zhang, J.C. Chiu. (2020). EYES ABSENT and TIMELESS integrate photoperiodic and temperature cues to regulate seasonal physiology in Drosophila. Proceedings of the National Academy of Sciences. U.S.A. 117(26): 15293-15304.
Active in academics, Cai served as a guest lecturer for Entomology 102 on the "Insect Nervous System" and for Entomology 10 on "Insect Circadian Rhythm." He also served as a teaching assistant for a number of UC Davis classes, including Applications, Values, and Ethics in Animal Research; Insect Physiology; Introduction to Biology: Ecology and Evolution; Introduction to Biology: Cell Functions; and Calculus for Biology and Medicine. In addition, he has assisted at Bohart Museum of Entomology open houses and at science program provided by Peregrine School, Davis.
Honored with a number of awards, Cai received a 2021 Chinese Government Award for Outstanding Self-Finance Students Abroad; a 2021 UC Davis Entomology W. Harry Lange, Jr. Memorial Travel Fund; 2021 UC Davis Marv Kinsey Scholarship; a 2020 Boroughs Welcome Fund Society for Research on Biological Rhythms (SRBR) Excellence Award; a 2020 UC Davis Sean and Anne Duffey and Hugh and Geraldine Dingle Research Fellowship; a 2019 UC Davis McBeth Memorial Scholarship; and a 2018 and 2017 UC Davis Henry A. Jastro Graduate Research Awards, among others.
Emily Meineke, assistant professor of urban landscape entomology, UC Davis Department of Entomology and Nematology, coordinates the department's seminars for the 2022-23 academic year. All 11 seminars will take place both person and virtually at 4:10 p.m. on Wednesdays in Room 122 of Briggs Hall except for the Nov. 9th and Dec. 7th seminars, which will be virtual only, she said. (See list of seminars)
For further information on the seminars or to resolve any technical difficulties with Zoom, contact Meineke at ekmeineke@ucdavis.edu.
- Author: Kathy Keatley Garvey
Cai, of the laboratory of molecular geneticist and physiologist Joanna Chiu, professor and vice chair of the UC Davis Department of Entomology and Nematology, will deliver his seminar both in-person and virtually at 4:10 p.m. in 122 Briggs Hall. The Zoom link:
https://ucdavis.zoom.us/j/95882849672.
Professor Chiu, his major professor, will serve as the host.
"Circadian clocks time daily rhythms inorganismal physiology and behavior to optimize health and fitness," Cai says in his abstract. In Drosophila, phosphorylation regulates time-of-day function of core clock proteins, including the transcriptional
activator CLOCK (CLK). However, it remains unclear whether CLK phosphorylation facilitates the closure of the negative feedback loop. In this study, we demonstrated casein kinase 1 alpha (CK1α) as a CLK kinase and mapped CK1α-dependent CLK phosphorylation sites using mass spectrometry. Our genetic and biochemical analyses revealed that upon CK1α phosphorylation at CLK(S13), CLK occupancy at circadian promoters decreases, thereby sequestering CLK transcriptional activity. Moreover, our results suggest that the transcriptional repressor PERIOD (PER) facilitates CK1α-CLK interaction."
"This study highlights the importance of post-translational regulation of circadian rhythms," Cao noted. "Finally, together with previous studies in fungi and mammals, our results suggest a conserved feature in eukaryotic clocks by which transcriptional repressors recruit CK1s to modulate the activity of transcription activators."
A native of southeast Asia, Cai holds two degrees from China Agricultural University, Beijing: a bachelor of science degree (2014) in plant protection and a master's degree in entomology (2016).
What sparked his interest in entomology? "The insect world presented to me the diversity of species when I was a kid," he related. "Since then, I have wondered about the origin and evolution of species. I was lucky to cultivate my interest as an undergrad and then a master student in Chinese Agricultural University. As a PhD student in the Department of Entomology and Nematology at UC Davis, this interest expanded to the cellular and molecular mechanisms of evolution and adaptation. Upon my graduation in summer 2022, I continued my postdoctoral research in the Chiu Lab. I hope this will prepare me to become a professor in biological sciences."
Cai completed an International Chronobiology Summer School (virtual) in 2020 and a UC Davis Comprehensive Course in Flow Cytometry in 2019. His publications include:
- Cai YD*, Joshi R*, Xia Y, Chiu JC, Emery P (2022) PERIOD phosphoclusters control temperature compensation of the Drosophila circadian clock, Frontiers in Physiology. 13: 888262.
- Cai YD, Sotelo SH, Jackson K, Chiu JC (2022) Assaying circadian locomotor activity rhythm in Drosophila, in “Circadian Rhythms” in NeuroMethods series. ed. M. Hatori, T. Hirota, and S. Panda. Springer Nature, Switzerland.
-
Cai Y.D., Y. Xue, C. Truong, J. Del-Carmen Li, C. Ochoa, J.T. Vanselow, K.A. Murphy, Y.H. Li, X. Liu, B.L. Kunimoto, H. Zheng, C. Zhao, Y. Zhang, A. Schlosser, J.C. Chiu (2021). CK2 inhibits TIMELESS nuclear export and modulates CLOCK transcriptional activity to regulate circadian rhythms. Current Biology 31(3): 502-514.
- Cai, Y.D., J.C. Chiu (2021). Timeless in animal circadian clocks and beyond. FEBS Journal (Online ahead of print). doi: 10.1111/febs.16253.
-
Abrieux, A., Y. Xue, Y. Cai, K.M. Lewald, H.N. Nguyen, Y. Zhang, J.C. Chiu. (2020). EYES ABSENT and TIMELESS integrate photoperiodic and temperature cues to regulate seasonal physiology in Drosophila. Proceedings of the National Academy of Sciences. U.S.A. 117(26): 15293-15304.
Active in academics, Cai served as a guest lecturer for Entomology 102 on the "Insect Nervous System" and for Entomology 10 on "Insect Circadian Rhythm." He also served as a teaching assistant for a number of UC Davis classes, including Applications, Values, and Ethics in Animal Research; Insect Physiology; Introduction to Biology: Ecology and Evolution; Introduction to Biology: Cell Functions; and Calculus for Biology and Medicine. In addition, he has assisted at Bohart Museum of Entomology open houses and at science program provided by Peregrine School, Davis.
Honored with a number of awards, Cai received a 2021 Chinese Government Award for Outstanding Self-Finance Students Abroad; a 2021 UC Davis Entomology W. Harry Lange, Jr. Memorial Travel Fund; 2021 UC Davis Marv Kinsey Scholarship; a 2020 Boroughs Welcome Fund Society for Research on Biological Rhythms (SRBR) Excellence Award; a 2020 UC Davis Sean and Anne Duffey and Hugh and Geraldine Dingle Research Fellowship; a 2019 UC Davis McBeth Memorial Scholarship; and a 2018 and 2017 UC Davis Henry A. Jastro Graduate Research Awards, among others.
Cai was a member of the Entomology Band, comprised of seven UC Davis graduate students who performed at Briggs Hall during the 2018 campuswide Picnic Day celebration. Cao, the drummer, dressed as a fruit fly. Entomology Today, a publication of the Entomological Society of America, featured the band in a June 2018 edition.
Emily Meineke, assistant professor of urban landscape entomology, UC Davis Department of Entomology and Nematology, coordinates the department's seminars for the 2022-23 academic year. All 11 seminars will take place both person and virtually at 4:10 p.m. on Wednesdays in Room 122 of Briggs Hall except for the Nov. 9th and Dec. 7th seminars, which will be virtual only, she said. (See list of seminars)
For further information on the seminars or to resolve any technical difficulties with Zoom, contact Meineke at ekmeineke@ucdavis.edu.