Posts Tagged: INSV
Research Update: Thrips migration from the hills?
“In the coastal areas where spotted wilt is a serious problem ... there is much to be learned concerning the seasonal migrations and local host succession of the thrips”
At first, this looks like a quote from 2020 or 2022 made in reference to the recent outbreaks of Impaciens necrotic spot virus (INSV), a thrips-transmitted disease currently affecting lettuce. But the quote is actually pulled from a UC publication titled Thrips of economic importance in California, authored by Professor Stanley Bailey in 1938.
The lettuce industry here in the Salinas Valley has been hit hard by INSV the past few years, and understanding the biology of the thrips that vectors the virus could be critical for management. But as Bailey noted almost 100 years ago, fully understanding the biology of western flower thrips has been elusive for decades.
In Thrips of economic importance in California, Bailey also noted that thrips in coastal areas tend to spend their summers at higher altitudes, but as native hosts dry up, they can concentrate on nearby crops. I wondered if such a migration could help explain the increase in thrips and INSV pressure the past few falls. With advances in thrips collection methods (i.e., sticky cards) and changes in cropping patterns, I was curious -- could we could observe the migration that Bailey described nearly 100 years ago?
Methods: With help from John Massa (Comgro) and a team from Braga Fresh (Eric Morgan, Katie Chiapuzio, and Jaylen Calabro), I set up a loose transect of 10 sticky card traps at about 4' off the ground (Figure 1). The transect spanned 0.38 miles (610 m) and an elevation change of 325 ft (99 m).
The first traps were deployed on June 5th and the last traps were collected on October 25th. We swapped out cards every two weeks for a total of 10 sets of cards. Some cows used two of the lower traps as scratching posts, so we were limited to 8 traps for most of the trial.
Sticky cards were taken back to the lab to count any thrips that fit the general description of Western flower thrips, Frankliniella occidentalis: less than 2 mm long, overall yellow to brown body color. Some larger, black thrips were occasionally found on traps and were excluded from overall counts.
Hypothesis: Thrips migrate down from the hills in late summer and early fall, increasing the thrips pressure in the valley which could increase the risk of spreading INSV.
Expected Results: If thrips counts are high in the hills in summer, but drop as populations rise in the valley, then this would be good support for Bailey's note and my hypothesis (Figure 2A). Alternatively, if thrips populations in the hills are consistent across time (Figure 2B), or if their population fluctuations match what is going on in the valley (Figure 2C), then it is unlikely that a mass migration is occurring.
Results: The transect results are summarized in figure 3. In panel A, the average thrips per week is plotted over time, with cards grouped by location (top of the hill, middle of the hill, or towards the bottom). The bottom traps were mostly surrounded by dried grass, while the top and middle traps were generally near chaparral plants that stayed green and flowering throughout the summer and into the fall. You can see an increase in thrips captures from June into July, followed by a dip in early august, and two more peaks in mid-August and early October (following that three-day heatwave). Compared to the valley counts (red line), the number of thrips captured on the hill was much higher, an average of 13 times higher than in the Valley. Adjusting the scale of the Valley-level trap counts (Figure 3B), we can see the Valley traps somewhat followed a similar pattern - thrips populations peaked in early June, had a few weeks of low counts in early August, then peaked again in mid-August and early October. With some variation, adult thrips captures in the hills followed a similar pattern to those captured nearby in the Valley.
Preliminary Conclusions: Contrary to my hypothesis, this small study does not provide evidence that thrips migrate en masse from the hills into the Salinas Valley. The hills maintained some green vegetation and flowers throughout the year, so thrips may not be driven to the Valley like Bailey described. Instead, the hills supported high thrips population throughout the summer and into the fall, which may have acted more like a continuous source of thrips into the valley. This could have interesting effects on INSV epidemiology, depending on whether the host plants in the hills can acquire INSV.
We of course cannot rely on a single transect in one year to conclude that thrips never migrate en mass into the Valley. This year we had an atypical, cool, wet spring that may have changed if or how thrips migrate. Perhaps migration only occurs in years with a drier, warmer spring. We also cannot discount the fact that the thrips we counted may not all be Western flower thrips; the identification characteristics we used (less than 2 mm long, overall yellow to brown body color) are not diagnostic of Western flower thrips. The next steps in this study would be to set up additional transects next year and live collection of thrips off of vegetation. By setting up additional transects (and getting them set up earlier in the season), we could determine if this preliminary transect was an anomaly, or if thrips are not behaving the way that Bailey described in 1938. Live collection of thrips is necessary to determine what proportion of thrips in the hills are Western flower thrips that can vector INSV. Either way, we are one step closer to understanding the seasonal migrations and local host succession of thrips, which could help us in our fight against INSV.
Much thanks to John Massa, Eric Morgan, Katie Chiapuzio, Jaylen Calabro, Jasmine Rodriguez, Luis Ramirez-Espinoza, and Carlos Rodriguez Lopez!
Research Update: Sampling for INSV+ thrips in vegetable transplants
We are getting to the time of year where lettuce production winds down in the Salinas Valley and ramps up in the desert around Yuma, Arizona. Unlike in the Salinas Valley, the desert has not been hit as hard by Impaciens necrotic spot virus (INSV), the virus that is transmitted to lettuce by Western flower thrips (F. occidentalis). When the virus does show up in the desert, the primary infection can often be traced back to INSV-infected thrips that arrived on vegetable transplants from coastal California (Palumbo, 2022)
These finding stirred up concern in the local ag community – could vegetable transplants also be a significant source of new INSV infections in the Salinas Valley? There are instances where recently transplanted fields start showing INSV symptoms soon after planting (Figure 1), but it is challenging to nail down if they were infected before or after transplanting. After gaining some advice from John Palumbo of the University of Arizona (who has been spearheading the ISNV work in the desert), I set out to sample thrips from local transplant nurseries.
Hypothesis: Vegetable transplants are NOT a major source of INSV-infected thrips in the Salinas Valley. Although this hypothesis may seem contrary to the findings from Yuma, it all comes down to timing of transplant production and background levels of thrips and INSV. As summarized in Figure 2, weekly thrips activity is low in spring and early summer but high in late summer and early spring. [check out an interactive version of these data: Salinas Valley Lettuce Pest Mapping Tool]. This difference in activity somewhat corresponds to when transplants are grown for local use (spring and early summer) versus desert use (late summer and fall). Transplants that are sent to Yuma are grown when thrips populations and INSV pressure has been historically high – putting them at higher risk of carrying INSV+ thrips.
Species confirmation and virus testing: I collaborated with Daniel Hasegawa (USDA-ARS) for species confirmation and virus testing. Daniel and his team used a genetic testing method called multiplex RT-qPCR to determine if the adult and larval thrips were 1) Western flower thrips (F. occidentalis), 2) Onion thrips (Thrips tabaci), or 3) some other thrips species AND if the thrips were carrying 1) INSV or 2) Tomato spotted wilt virus (TSWV, similar to INSV). For small samples (five or fewer thrips), Daniel's team tested each thrips individually. For samples with more than five thrips, they tested half of the thrips as a pooled sample. If this sub-sample tested positive for INSV, a subset of the remaining thrips were tested individually.
Results: From March through May, we only collected 52 thrips, 50 of which were identified as western flower thrips and none which tested positive for INSV or TSWV. In June, collection shot up almost 10-fold and doubled again in July, somewhat tracking the thrips population increase in the valley (Figure 4). In June and July, thrips densities were consistently higher on brassica transplants compared to lettuce transplants (Figure 5).
Despite collecting over 2,000 individual thrips (1,333 adults and 782 larvae), only two samples, or 1.64% of the tested thrips, tested positive for INSV. The two samples which has positive hits for INSV were collected in June, one off or organic broccoli and one off of conventional cauliflower. None of the thrips collected off of lettuce transplants tested positive for INSV.
Preliminary Conclusions: For the Salinas Valley, the thrips populations on transplants appear to mirror the thrips population in the valley. This is perhaps not too surprising since most transplants are grown on uncovered benches near crop fields. Despite lettuce being a better host for Western flowerthrips (Joseph & Koike, 2021), we consistently collected morethrips frombrassica transplants. We attribute this difference to management practices (e.g., insecticide applications on lettuce transplants) and because brassica transplants tend to stay at nurseries for an additional week.
With this in mind, we may expect that transplanted lettuce fields in the Salinas Valley are more likely to be infected by INSV+ thrips coming in from nearby areas (the prior crop, nearby fields, or weedy areas) rather than thrips from transplant nurseries. Although I would expect to find more INSV+ thrips on vegetable transplants in a year with higher INSV incidence (2023 incidence was considerably lower than prior years), the risk of INSV+ thrips coming in from other sources would increase as well.
For the desert, however, the background risk of INSV is much lower because INSV levels drop off over the summer. In this context, even a handful of INSV+ thrips on transplants pose a proportionally greater risk than in the Salinas Valley. Recognizing this risk to growing regions beyond the Salinas Valley, it is important to continue monitoring INSV levels in transplant nurseries and to work with nurseries to minimize the risk of transporting INSV+ thrips.
References:
- Palumbo, JC, 2022. Thrips and INSV Management in Desert Lettuce. University of Arizona VegIPM Update, Vol 13, No 22, Nov 2, 2022. https://acis.cals.arizona.edu/docs/default-source/agricultural-ipm-documents/vegetable-ipm-updates/2022/thrips-and-insv-management-in-desert-lettuce.pdf?sfvrsn=3088b8b9_2
- Joseph, SV, Koike, ST, 2021. Could Broccoli and Cauliflower Influence the Dispersal Dynamics of Western Flower Thrips (Thysanoptera: Thripidae) to Lettuce in the Salinas Valley of California? Environmental Entomology 50, 995–1005. https://doi.org/10.1093/ee/nvab050
Thanks to Daniel Hasegawa and the entire Hasegawa lab (USDA-ARS, Salinas); John Palumbo (University of Arizona); Kevin Costa, Thomas Costa, and Manuel Aguirre (Headstart Nursery); Francisco Castaneda and Omar Saenz (Growers Transplanting); Lupe Guillen, Maria Alfaro, Alejandro Palma-Carias, and Jim Wilkinson (Dole Fresh Vegetables); Jasmine Rodriguez; Luis Ramirez-Espinoza (CSU-MB); and the California Leafy Greens Research Board.
/table>/span>2023 Pest Management Meeting: Updated Announcement
The 2023 Salinas Fall Pest Management Meeting will be held on the afternoon of Tuesday December 5th, 2023
(postponed from the original date of Nov 2)
Pre-registration is encouraged but not required:
https://surveys.ucanr.edu/survey.cfm?surveynumber=41558
Se recomienda inscripción de antemano:
https://surveys.ucanr.edu/survey.cfm?surveynumber=41560
Traducción simultánea al Español
Non-INSV Host Plants for Habitat Plantings
Non- Impatiens Necrotic Spot Virus (INSV) Plants for Habitat Plantings
Richard Smith1, Daniel Hasegawa2, Kirsten Pearsons1 and Yu-Chen Wang1
1 - UCCE Monterey County and 2 - USDA ARS, Salinas
Growers plant habitat plantings to provide various benefits on the farm. Insectaries and hedge rows provide a food source and habitat for beneficial insects that can prey upon insect pests of crops. Plantings that occur on slopes and berms can also help stabilize the soil and compete with weeds. Additionally, cover crops provide numerous benefits to the soil and help cycle nutrients, but also provide habitat for beneficial insects.
However, given the wide host range of impatiens necrotic spot virus (INSV), it is critical to avoid planting species of habitat plants that serve as a host for INSV or the thrips that spread this virus. Over the past three years, Smith and Hasegawa have tested numerous plant species to address whether they can serve as a host for INSV. Table 1 shows results of a survey of plants in the Salinas Valley near areas affected by INSV. The greater the number of samples with a negative test provides greater confidence that that plant is not a host. Not all potential habitat plants have been tested to date and more sampling of other species needs to be carried out. However, given our current understanding, the plants shown in Table 1 would be the best candidate species to use as habitat plantings to avoid introducing a known host for INSV. Additional thrips transmission experiments to each of the described plant species will also help resolve their status as hosts for INSV.
Table 1. Recommended non-hosts species of INSV for use as habitat plantings on vegetable farms.
1 - The mustards used for cover crops (Brassica juncea and Sinapis alba) were not tested in the survey. The related weedy mustard species (B. rapa and B. nigra) both tested negative for INSV; however, Short pod mustard (Hirshfeldia incana) had 4% infected plants. Clearly, evaluations of cover crop mustards as hosts for INSV needs to be carried out to clarify their status
2 - There are numerous other species used in hedgerow plantings, but they have not been tested as hosts of INSV at this time.
New UCCE advisors bring fresh ideas to protect lettuce from INSV, Pythium wilt
Salinas Valley lettuce growers lost about $150 million in 2022 due to diseases
A stormy winter could portend another devastating year for the lettuce industry in the Salinas Valley, which saw approximately $150 million in lost gross revenue in 2022 due to INSV (impatiens necrotic spot virus) and associated diseases. Recent drenching rains might mean more weeds – overwintering “reservoirs” for the tiny insect, the Western flower thrips, that carries INSV.
Or the extreme precipitation could benefit growers, as thrips in the soil – during their intermediate stage of development – might be drowned in the waterlogged fields.
As with so many aspects of the INSV crisis, the ultimate effects of flooded fields on thrips populations remain unknown.
“We don't know if thrips are just so persistent and so stable in that pupal stage that maybe they will emerge unaffected,” said Kirsten Pearsons, University of California Cooperative Extension integrated pest management farm advisor for Santa Cruz, Monterey and San Benito counties. “There's just so much about their biology and ecology in the Salinas Valley that we just don't know.”
The mystery of thrips, INSV and soilborne diseases (namely Pythium wilt) is why UC Agriculture and Natural Resources assigned Pearsons to the area last November and hired Yu-Chen Wang in October as UCCE plant pathology advisor for the three counties.
“They're stepping in at a critical moment,” said Richard Smith, the region's UCCE vegetable crop production and weed science advisor who retired in January after a 37-year career. “They've gotten grants funded already – and that's just incredible. They're hitting the ground running.”
Experienced in disease diagnosis and collaboration with growers and industry partners, Wang said her pathology background – paired with Pearsons' entomology expertise – will be crucial in addressing INSV and other diseases.
“It is important for Kirsten and me to work together and provide different insights for the vector and the pathogen, respectively,” Wang said.
‘It's going to take everything to get a crop'
One priority is untangling the dynamics of INSV and Pythium wilt co-occurrence – the subject of ongoing research by JP Dundore-Arias, a plant pathologist at California State University, Monterey Bay. While the vegetables may tolerate one disease or the other, their one-two punch often deals the lethal blow.
“The challenge is – which is why it's great to have Yu-Chen and Kirsten – is that we have so many problems now, whether it's Fusarium (wilt), or Verticillium (wilt), or Pythium, or INSV,” said Mark Mason, pest control adviser for Nature's Reward, which primarily grows lettuces on 5,000 acres across the Salinas Valley.
Mason said that co-infections on his crops (sometimes with three or four diagnosed diseases) make it difficult to assign monetary damages to a specific pathogen, but he noted he has seen fields with “100% loss.” According to the Grower-Shipper Association of Central California, about 11,500 acres were deemed not harvestable in 2022, representing 12% of lettuce industry acreage.
Given the gravity and complexity of the disease dilemma, Pearsons said she has been fielding calls from growers seeking new and better solutions – ways to improve existing tools, techniques borrowed from other crop systems, and additional biological or chemical means of control.
And although there are a couple of pesticides that manage the disease-carrying thrips reasonably well, growers and researchers are worried about their diminishing efficacy due to overuse. Plus, they only constitute a short-term fix.
“Managing the thrips will only reduce the amount of INSV that can get transmitted,” Pearsons explained. “You can kill 99.9% of the thrips, but you get one thrips that has INSV that enters a field, and now you have an infected lettuce plant. All of the thrips are going to come and they can spread it from there; pesticide slows things down, but it's not going to eliminate it.”
Finding disease-tolerant lettuce cultivars is a more sustainable approach. Trials conducted last year by Smith, Wang and others identified several varieties that appeared to hold up well to Pythium and INSV. While additional research could maximize their potential benefit, Wang said even the hardier cultivars will lose their resistance over time, and a multi-layered INSV strategy with “integrated management tools” is crucial.
“We realized, when this thing started happening, that we cannot spray our way out of this problem,” Mason said. “We need varieties; we need management practices; we need pesticides…it just seems like it's going to take everything to get a crop.”
Weeds key to disease control
An all-hands-on-deck approach helped control thrips-harboring weeds last winter. With fields drying out from January storms, Smith said communities must get back to weed management – with a focus on prominent weed hosts for INSV and neglected areas adjacent to farms. Hotspots of infection last year were traced to industrial lots that were overlooked during the weeding process.
“People can't lose sight of the fact that we still need to be controlling the weeds in key areas, because that's the reservoir of the virus during the winter,” Smith said. “We have to stay on task with that.”
Yet despite the diligent weed abatement, crop damage from INSV and Pythium was widespread in 2022, and Smith said it's “very possible” that high heat during the summer was a contributing factor to especially prevalent disease in fall. Thrips populations tend to thrive in warmer weather, Smith said, but much more research needs to be done to understand the basic biology of the insect, including how they acquire the virus and how they spread it.
High hopes for future
Pearsons cited the work of Daniel Hasegawa, a research entomologist with the U.S. Department of Agriculture, who leads teams in monitoring thrips populations in several locations across the Salinas Valley. Currently the counting of thrips on sticky card traps is done manually, but Pearsons and Mason mentioned the possibility of using AI and machine learning to expedite that process.
Mason said that the grower community is excited about the new technologies and ideas that Pearsons and Wang are bringing to the region. As a participant in the search for candidates to fill the advisor positions, Mason said “they were, in my opinion, by far the best fit for what we were looking for.”
“I hope they stay here for 30 years,” he added.
The new advisors both noted the palpable energy and cooperative spirit in the Salinas Valley to proactively meet the challenge.
“Looking to the past, there have been other outbreaks and diseases that they've managed to overcome,” Pearsons said. “These farmers are resilient and creative and I fully believe that lettuce will still be growing here for years to come – it might look a little different, and it might take a little bit of a painful period to get to that point, but I think that we're going to be able to come up with some solutions.”
And while there are concerns that some lettuce growers might decide to leave the region, Wang said she also believes in the industry's strong roots and rich history.
“Salinas Valley has had a beautiful climate for lettuce for so many years; there are some undeniable advantages here,” she said. “This is still the best place in the United States – and maybe the world – to grow lettuce.”
/h3>/h3>/h3>/h3>