UCCE Livestock Antimicrobial Stewardship

Lessons Learnt

 

A Natural Solution for California's Herds: African Catfish Peptides

California's cattle producers and agricultural communities are all too familiar with the rising challenge of antibiotic resistance, making common bacterial infections harder to treat in livestock. But imagine a future where we could tackle these infections with a natural, powerful alternative. Our research points to just that: antimicrobial peptides (AMPs) found in African catfish.

We're really excited about these peptides because African catfish thrive in pathogen-rich freshwater, naturally producing these robust immune compounds in their skin mucus as a defense. This natural origin makes them highly appealing alternatives to synthetic drugs.

Predicted Safety and Potent Action

One of the most compelling aspects of these AMPs is their predicted safety for mammals. Our initial computer analyses suggest that various catfish AMPs are generally recognized as safe (GRAS). We predict they'll be absorbed in the human intestine without causing liver, brain, or heart toxicity. Furthermore, lab tests on a promising peptide, NACAP-II, confirmed it was non-hemolytic, meaning it didn't damage rabbit red blood cells—a strong indicator of its potential safety for mammalian cells.

Beyond safety, these peptides demonstrate effectiveness against problematic bacteria. One study revealed NACAP-II's strong activity against Extended-Spectrum Beta-Lactamase (ESBL)-producing Escherichia coli—a critical concern for both animal and human health due to its resistance to many common antibiotics. Another peptide, ACAP-IV, also showed antibacterial activity against E. coli and Staphylococcus aureus. We believe these AMPs work by directly disrupting bacterial cell membranes, a mechanism that makes it harder for bacteria to develop resistance compared to how they resist traditional antibiotics.

 

The Path Forward

While these findings are very promising, we want to emphasize that this research is still in its early, laboratory stages. A key challenge we've identified is that some of these peptides have a high molecular weight, which might hinder their absorption if given orally. This means our future work will need to explore advanced delivery methods, potentially involving nanotechnology, or modify the peptides for better absorption and accumulation where they're needed most. Ultimately, more studies are essential to confirm their effectiveness and safety in living animals, such as cattle, and to develop strategies for large-scale production.

 

From Our Lab to Your Farm: Smarter Strategies for Antimicrobial Resistance

As fellow researchers who have been studying antimicrobial resistance (AMR) in California dairy cattle, we want to share some important insights from our recent work. Our studies highlight that while we don't focus on new types of drugs to replace antibiotics, the most critical "alternative" is actually smarter, more targeted management and a deep understanding of pathogen behavior on your farm. This approach aims to reduce the need for antibiotics or minimize the development and spread of resistance when antibiotics are necessary.

Identification, Synthesis, and In Vitro Activities of Antimicrobial Peptide from African Catfish against the Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli

 

 

 

Tackling Resistant Salmonella in Cull Cows

First, we've found that Salmonella in cull dairy cows, which contribute to the ground beef supply, often carries resistance to important antimicrobials like tetracyclines, ampicillin, and even ceftriaxone—a drug critical for human medicine. This is definitely a concern for public health. Our research shows that certain cow-level factors, such as prior antimicrobial treatment or culling due to lameness, are associated with higher odds of isolating resistant Salmonella. Conversely, culling a cow due to low milk production was associated with lower odds of resistance.

 

At the herd level, factors like the number of milking cows and monthly culling rates can also influence the presence of resistant Salmonella. This suggests that improving timely culling decisions—removing cows with mild disease problems before they escalate and require extensive antimicrobial therapy—could be an economical way to reduce the selection pressure for AMR. We also need to investigate specific reasons for culling, especially lameness, to understand its link to resistance.

 

Unpacking Mastitis: The Importance of Specificity

Second, regarding mastitis, we've extensively characterized Coagulase-negative Staphylococcus (CNS) species, which are the most common cause of intra-mammary infections (IMI). Historically, these have often been grouped into one class for convenience, or sometimes left untreated. However, our findings reveal a diverse range of different CNS species circulating on US dairies, with Staphylococcus chromogenes and Staphylococcus haemolyticus being the most prevalent. We've seen evidence of persistent subclinical infections, especially with S. chromogenes and S. simulans, where identical strains were isolated from the same udder quarter over consecutive sampling stages.

 

Our message here is that a better understanding of these specific CNS species and their genetic diversity is crucial for improved management and treatment outcomes. Instead of blanket approaches, identifying the predominant species on your farm can guide species-specific control strategies, including targeted treatment decisions to eliminate persistent infections and improvements in milking practices like teat dipping. This precise identification, perhaps through rapid and low-cost diagnostic tests, is a key step to managing mastitis effectively while minimizing broad-spectrum antibiotic use. The low number of clinical mastitis cases from CNS suggests they mainly cause subclinical chronic infections, reinforcing the need for targeted strategies.

 

Calves and Antibiotic Use: A Clear Connection

Finally, our work with pre-weaned dairy calves shows a direct link between antibiotic use and the rise of resistance. We observed that administering ceftiofur as a systemic injection or feeding neomycin-supplemented milk replacer to calves leads to an increased concentration of resistant Enterobacteriaceae in their feces. The peak of ceftiofur resistance occurred around three to four days after treatment, with levels decreasing to below pre-treatment levels by seven to eight days post-treatment. Similarly, neomycin resistance increased during administration and then decreased once the antibiotic was discontinued.

 

This clearly illustrates that AMR is acquired during treatment and can be lost when antimicrobial pressure is removed. This finding strongly supports the importance of prudent antimicrobial stewardship. While antibiotics are sometimes necessary, minimizing their use, especially extra-label use or prophylactic feeding where not strictly justified, can help preserve their effectiveness for when they are truly needed. Initial resistance observed in calves might also be linked to residual antibiotics in colostrum or environmental bacteria ingested by the calves.

 

The Real "Alternatives" are Smart Choices

In summary, the "alternatives" we emphasize aren't necessarily new medications, but rather strategic management decisions. This includes timely culling, species-specific diagnostics for mastitis, and responsible, prudent use of antibiotics in calves, all aimed at reducing the overall selection pressure for antimicrobial resistance on your dairy.

 

What specific management practices are you currently implementing to address antibiotic resistance on your farm?

 

Based on

  1. Molecular epidemiology of coagulase-negative Staphylococcus species isolated at different lactation stages from dairy cattle in the United States
  2. Association between herd management practices and antimicrobial resistance in Salmonella spp. from cull dairy cattle in Central California
  3. Estimating the Rates of Acquisition and loss of Resistance of Enterobacteriaceae to Antimicrobial Drugs in Pre-Weaned Dairy Calves

Our Research: Guiding California Dairies in the Fight Against Antimicrobial Resistance

As California dairy owners and farmers, our research provides crucial insights into managing antimicrobial resistance (AMR) on our operations. We want to emphasize the importance of judicious antibiotic use and strong stewardship practices to maintain herd health and preserve the effectiveness of these vital medicines.

Understanding Resistance Patterns in Your Herd

Our findings reveal important patterns of antimicrobial resistance in common bacteria (Escherichia coli and Enterococcus/Streptococcus spp.) found in the fecal samples of adult dairy cows across California. We observed very low resistance to several drugs commonly given to adult dairy cows, such as cephalosporins and penicillins. This tells us that these particular drugs remain effective when used appropriately.

However, we detected higher rates of AMR to drugs that aren't approved for use in lactating dairy cattle over months of age, including florfenicol, tildipirosin, tilmicosin, and tiamulin. The high resistance to florfenicol, for instance—a drug typically used in beef cattle or non-lactating dairy cattle and calves—might be linked to co-selection with other resistance genes or how resistance spreads between bacteria. These results truly underscore the importance of sticking to labeled drug uses and understanding how resistance can develop even to drugs not directly used in adult lactating cows.

Regional Differences and Management Impacts

We also identified significant differences in AMR across California's dairy regions and seasons. For instance, E. coli isolates from Northern California showed lower resistance to certain antibiotics like ceftiofur compared to the Northern San Joaquin Valley and Greater Southern California. We believe this difference is related to regional variations in management practices and how antibiotics are used, especially for mastitis prevention and treatment. It's noteworthy that some dairies in Northern California didn't use antibiotics for mastitis treatment or prevention, which contributed to lower AMR in those areas. This really suggests that management practices that reduce the overall need for antibiotic treatments can play a significant role in bringing down AMR. The seasonal variations we observed, with higher resistance often seen in winter for E. coli isolates, could be attributed to weather conditions that favor bacterial growth and increase disease, potentially leading to more antibiotic use.

The Dynamics of Antibiotic Treatment and Resistance

Our in-depth study on the dynamics of ceftiofur resistance further highlights the impact of antibiotic treatments. We found that while systemic ceftiofur treatment leads to a rapid increase in resistant Enterobacteriaceae, these levels typically return to pre-treatment baselines within a few days. However, populations of sensitive bacteria can remain suppressed for a longer period. We even observed a cyclical re-emergence of resistance, though at diminishing levels, possibly due to complex interactions within the gut bacteria. These dynamics are critical for us to consider for future AMR surveillance and when designing treatment strategies.

The Path Forward: Stewardship and Smart Choices

In summary, our research emphasizes that while we weren't focused on entirely new non-antibiotic products, the most important "alternative" approach to combating AMR on our dairies is through robust antibiotic stewardship and judicious use. This means making informed decisions in consultation with your veterinarians, selecting antibiotics based on known resistance patterns, adhering strictly to approved drug labels and treatment protocols, and, crucially, implementing best management practices that reduce the incidence of diseases requiring antibiotic intervention in the first place. By doing so, we can help ensure that the antibiotics we rely on for animal health remain effective for generations to come.

 

 

Event Primary Image
Honey bees on Matilija poppy
UC Master Gardeners of Monterey, San Benito & Santa Cruz Counties: Event

Celebrate National Honey Bee Day!

Event Date
Aug 16, 2025

 DISCOVER THE FASCINATING WORLD OF HONEYBEES! Learn why these essential pollinators play a vital role in our environment This fun and educational event is perfect for the whole family!Live bees in an observational hiveHoney tastingHands-on kids activitiesTips on how to support pollinators in…
UC Master Gardeners of Monterey, San Benito & Santa Cruz Counties
View Event
Primary Image
white star magnolia flower
Under the Solano Sun: Article

Thoughts from Weedy Acres

August 6, 2025
By Jennifer M Baumbach
Blog by Betsy BuxtonIt’s been a while since I last wrote from Weedy Acres, and I hope you remember me.  The wind is still blowing and the weeds are still thriving, BUT something new!  As I looked out the window for inspiration, what should I spot but a bloom on my Star magnolia (Magnolia stellata)!…
View Article
Primary Image
rice field with bakanae

2025 Pest Issues Update

August 6, 2025
By Consuelo B Baez Vega
I have seen several issues with arthropods and diseases so far this year. Here’s a quick rundown:  Bakanae: Like in previous years, there have been several fields with heavy Bakanae infections. While the number of plants infected is high, I don’t think any of those fields are going to experience a…
View Article
Primary Image
Fava Beans are a useful cover crop, and their leaves can be sauteed like any other edible green. J. Alosi
The Real Dirt: Article

Meeting Nature Halfway: Sustainable Gardening

August 5, 2025
Imagine a healthy garden that grows, blooms, and produces food for you, your family and your neighbors, a garden that costs you very little money because everything it needs is already provided. Welcome to the sustainable garden! The Cambridge Dictionary defines sustainable as “causing little or no damage to…
View Article
Primary Image
Western yellowjacket in Marin County. (Photo by Kathy Keatley Garvey)

Beware of Yellowjacket Nests

August 5, 2025
By Kathy Keatley Garvey
 Beware of yellowjacket nests in our state parks--and elsewhere, as well!Self-described "Wasp Woman" UC Davis Distinguished Professor Emerita Lynn Kimsey who directed the Bohart Museum of Entomology for 34 years until her retirement last year, continues to field many a question about insects, including…
View Article
Event Primary Image
CSA subscription box
Grown in Marin: Event

Webinar: How to generate recurring revenue on your farm (through subscriptions)

Event Date
Dec 2, 2025

This webinar details a step-by-step plan for setting up subscription box orders to generate monthly recurring revenue for your farm using easy-to-use software to set up your online store. Based on his firsthand experience with his farm, Jeff explains how to gain early adoption of the subscription box model,…
Grown in Marin
View Event
Event Primary Image
grant application
Grown in Marin: Event

Webinar: Understanding FACT’s Fund-a-Farmer grants for 2025

Event Date
Oct 28, 2025

Looking for funding that can help take your farm to the next humane farming level? One that’s easy to apply for and report on? Look no further, FACT’s Fund-a-Farmer grant program is the perfect way to improve the lives of the livestock on your farm. In this session FACT’s Humane Farming Director, Samantha…
Grown in Marin
View Event
Event Primary Image
goats and sheep
Grown in Marin: Event

Webinar: Humane handling for sheep & goats

Event Date
Sep 16, 2025

Whether you’re considering becoming a sheep or goat farmer, have recently started, or have been raising them for many years, you’ll need to have a method for handling them. Sheep need to be sheared, both sheep and goats need health checks, hoof trims, deworming, ear tagging, weighing, trailer loading, and…
Grown in Marin
View Event
Event Primary Image
sustainably raised poultry
Grown in Marin: Event

Webinar: Humane benefits of slower growing poultry

Event Date
Sep 9, 2025

As consumer demand for ethically produced food continues to rise, the poultry industry is at a crossroads. This webinar, explores how transitioning to slower-growing chicken breeds can improve animal welfare, align with consumer values, support more sustainable farming practices, plus they're just plain fun…
Grown in Marin
View Event
Article

UC ANR’s New Programmatic Structure

August 5, 2025
By Brent Hales
Effective July 1, 2025, UC ANR has a new programmatic structure to better represent the breadth of research and extension efforts of our academics and programmatic staff while facilitating collaboration between UC ANR-affiliated personnel to advance the UC ANR Strategic Vision.
View Article