UCCE Livestock Antimicrobial Stewardship

Lessons Learnt

 

A Natural Solution for California's Herds: African Catfish Peptides

California's cattle producers and agricultural communities are all too familiar with the rising challenge of antibiotic resistance, making common bacterial infections harder to treat in livestock. But imagine a future where we could tackle these infections with a natural, powerful alternative. Our research points to just that: antimicrobial peptides (AMPs) found in African catfish.

We're really excited about these peptides because African catfish thrive in pathogen-rich freshwater, naturally producing these robust immune compounds in their skin mucus as a defense. This natural origin makes them highly appealing alternatives to synthetic drugs.

Predicted Safety and Potent Action

One of the most compelling aspects of these AMPs is their predicted safety for mammals. Our initial computer analyses suggest that various catfish AMPs are generally recognized as safe (GRAS). We predict they'll be absorbed in the human intestine without causing liver, brain, or heart toxicity. Furthermore, lab tests on a promising peptide, NACAP-II, confirmed it was non-hemolytic, meaning it didn't damage rabbit red blood cells—a strong indicator of its potential safety for mammalian cells.

Beyond safety, these peptides demonstrate effectiveness against problematic bacteria. One study revealed NACAP-II's strong activity against Extended-Spectrum Beta-Lactamase (ESBL)-producing Escherichia coli—a critical concern for both animal and human health due to its resistance to many common antibiotics. Another peptide, ACAP-IV, also showed antibacterial activity against E. coli and Staphylococcus aureus. We believe these AMPs work by directly disrupting bacterial cell membranes, a mechanism that makes it harder for bacteria to develop resistance compared to how they resist traditional antibiotics.

 

The Path Forward

While these findings are very promising, we want to emphasize that this research is still in its early, laboratory stages. A key challenge we've identified is that some of these peptides have a high molecular weight, which might hinder their absorption if given orally. This means our future work will need to explore advanced delivery methods, potentially involving nanotechnology, or modify the peptides for better absorption and accumulation where they're needed most. Ultimately, more studies are essential to confirm their effectiveness and safety in living animals, such as cattle, and to develop strategies for large-scale production.

 

From Our Lab to Your Farm: Smarter Strategies for Antimicrobial Resistance

As fellow researchers who have been studying antimicrobial resistance (AMR) in California dairy cattle, we want to share some important insights from our recent work. Our studies highlight that while we don't focus on new types of drugs to replace antibiotics, the most critical "alternative" is actually smarter, more targeted management and a deep understanding of pathogen behavior on your farm. This approach aims to reduce the need for antibiotics or minimize the development and spread of resistance when antibiotics are necessary.

Identification, Synthesis, and In Vitro Activities of Antimicrobial Peptide from African Catfish against the Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli

 

 

 

Tackling Resistant Salmonella in Cull Cows

First, we've found that Salmonella in cull dairy cows, which contribute to the ground beef supply, often carries resistance to important antimicrobials like tetracyclines, ampicillin, and even ceftriaxone—a drug critical for human medicine. This is definitely a concern for public health. Our research shows that certain cow-level factors, such as prior antimicrobial treatment or culling due to lameness, are associated with higher odds of isolating resistant Salmonella. Conversely, culling a cow due to low milk production was associated with lower odds of resistance.

 

At the herd level, factors like the number of milking cows and monthly culling rates can also influence the presence of resistant Salmonella. This suggests that improving timely culling decisions—removing cows with mild disease problems before they escalate and require extensive antimicrobial therapy—could be an economical way to reduce the selection pressure for AMR. We also need to investigate specific reasons for culling, especially lameness, to understand its link to resistance.

 

Unpacking Mastitis: The Importance of Specificity

Second, regarding mastitis, we've extensively characterized Coagulase-negative Staphylococcus (CNS) species, which are the most common cause of intra-mammary infections (IMI). Historically, these have often been grouped into one class for convenience, or sometimes left untreated. However, our findings reveal a diverse range of different CNS species circulating on US dairies, with Staphylococcus chromogenes and Staphylococcus haemolyticus being the most prevalent. We've seen evidence of persistent subclinical infections, especially with S. chromogenes and S. simulans, where identical strains were isolated from the same udder quarter over consecutive sampling stages.

 

Our message here is that a better understanding of these specific CNS species and their genetic diversity is crucial for improved management and treatment outcomes. Instead of blanket approaches, identifying the predominant species on your farm can guide species-specific control strategies, including targeted treatment decisions to eliminate persistent infections and improvements in milking practices like teat dipping. This precise identification, perhaps through rapid and low-cost diagnostic tests, is a key step to managing mastitis effectively while minimizing broad-spectrum antibiotic use. The low number of clinical mastitis cases from CNS suggests they mainly cause subclinical chronic infections, reinforcing the need for targeted strategies.

 

Calves and Antibiotic Use: A Clear Connection

Finally, our work with pre-weaned dairy calves shows a direct link between antibiotic use and the rise of resistance. We observed that administering ceftiofur as a systemic injection or feeding neomycin-supplemented milk replacer to calves leads to an increased concentration of resistant Enterobacteriaceae in their feces. The peak of ceftiofur resistance occurred around three to four days after treatment, with levels decreasing to below pre-treatment levels by seven to eight days post-treatment. Similarly, neomycin resistance increased during administration and then decreased once the antibiotic was discontinued.

 

This clearly illustrates that AMR is acquired during treatment and can be lost when antimicrobial pressure is removed. This finding strongly supports the importance of prudent antimicrobial stewardship. While antibiotics are sometimes necessary, minimizing their use, especially extra-label use or prophylactic feeding where not strictly justified, can help preserve their effectiveness for when they are truly needed. Initial resistance observed in calves might also be linked to residual antibiotics in colostrum or environmental bacteria ingested by the calves.

 

The Real "Alternatives" are Smart Choices

In summary, the "alternatives" we emphasize aren't necessarily new medications, but rather strategic management decisions. This includes timely culling, species-specific diagnostics for mastitis, and responsible, prudent use of antibiotics in calves, all aimed at reducing the overall selection pressure for antimicrobial resistance on your dairy.

 

What specific management practices are you currently implementing to address antibiotic resistance on your farm?

 

Based on

  1. Molecular epidemiology of coagulase-negative Staphylococcus species isolated at different lactation stages from dairy cattle in the United States
  2. Association between herd management practices and antimicrobial resistance in Salmonella spp. from cull dairy cattle in Central California
  3. Estimating the Rates of Acquisition and loss of Resistance of Enterobacteriaceae to Antimicrobial Drugs in Pre-Weaned Dairy Calves

Our Research: Guiding California Dairies in the Fight Against Antimicrobial Resistance

As California dairy owners and farmers, our research provides crucial insights into managing antimicrobial resistance (AMR) on our operations. We want to emphasize the importance of judicious antibiotic use and strong stewardship practices to maintain herd health and preserve the effectiveness of these vital medicines.

Understanding Resistance Patterns in Your Herd

Our findings reveal important patterns of antimicrobial resistance in common bacteria (Escherichia coli and Enterococcus/Streptococcus spp.) found in the fecal samples of adult dairy cows across California. We observed very low resistance to several drugs commonly given to adult dairy cows, such as cephalosporins and penicillins. This tells us that these particular drugs remain effective when used appropriately.

However, we detected higher rates of AMR to drugs that aren't approved for use in lactating dairy cattle over months of age, including florfenicol, tildipirosin, tilmicosin, and tiamulin. The high resistance to florfenicol, for instance—a drug typically used in beef cattle or non-lactating dairy cattle and calves—might be linked to co-selection with other resistance genes or how resistance spreads between bacteria. These results truly underscore the importance of sticking to labeled drug uses and understanding how resistance can develop even to drugs not directly used in adult lactating cows.

Regional Differences and Management Impacts

We also identified significant differences in AMR across California's dairy regions and seasons. For instance, E. coli isolates from Northern California showed lower resistance to certain antibiotics like ceftiofur compared to the Northern San Joaquin Valley and Greater Southern California. We believe this difference is related to regional variations in management practices and how antibiotics are used, especially for mastitis prevention and treatment. It's noteworthy that some dairies in Northern California didn't use antibiotics for mastitis treatment or prevention, which contributed to lower AMR in those areas. This really suggests that management practices that reduce the overall need for antibiotic treatments can play a significant role in bringing down AMR. The seasonal variations we observed, with higher resistance often seen in winter for E. coli isolates, could be attributed to weather conditions that favor bacterial growth and increase disease, potentially leading to more antibiotic use.

The Dynamics of Antibiotic Treatment and Resistance

Our in-depth study on the dynamics of ceftiofur resistance further highlights the impact of antibiotic treatments. We found that while systemic ceftiofur treatment leads to a rapid increase in resistant Enterobacteriaceae, these levels typically return to pre-treatment baselines within a few days. However, populations of sensitive bacteria can remain suppressed for a longer period. We even observed a cyclical re-emergence of resistance, though at diminishing levels, possibly due to complex interactions within the gut bacteria. These dynamics are critical for us to consider for future AMR surveillance and when designing treatment strategies.

The Path Forward: Stewardship and Smart Choices

In summary, our research emphasizes that while we weren't focused on entirely new non-antibiotic products, the most important "alternative" approach to combating AMR on our dairies is through robust antibiotic stewardship and judicious use. This means making informed decisions in consultation with your veterinarians, selecting antibiotics based on known resistance patterns, adhering strictly to approved drug labels and treatment protocols, and, crucially, implementing best management practices that reduce the incidence of diseases requiring antibiotic intervention in the first place. By doing so, we can help ensure that the antibiotics we rely on for animal health remain effective for generations to come.

 

 

Rows of seedlings at Kearney Ag Research & Extension Center
Site - Research and Extension Center

Kearney Agricultural Research and Extension Center

Since its official dedication in 1965 Kearney Agricultural Research and Extension Center (KARE) has achieved international acclaim for leadership in the development of new fruit, nut, and grape varieties, innovative cultural and irrigation practices, pest and disease management techniques, and postharvest…
View Site
Site

CalFresh Healthy Living, UCCE

To inspire and empower under-served Californians to improve their health by promoting awareness, education, and community change through diverse partnerships, resulting in healthy eating and active living.
View Site
Site - County Office

UC Cooperative Extension - Fresno County

True to the mission of the land grant universities, UC Agriculture and Natural Resources connects the power of UC research in agriculture, natural resources, nutrition and youth development with local communities to improve the lives of all Californians.
View Site
Elizabeth Field
Site - County Office

Kings County UC Cooperative Extension

Who We AreUC Cooperative Extension (UCCE) serves the local citizens of Kings County through agriculture research and education to develop and improve agricultural practices; youth development programs to develop life skills, leadership and community service through (hands-on) education; nutrition education…
View Site
Site

UC Master Gardeners of Tulare and Kings County

 Welcome to UC Master Gardeners of Tulare/Kings CountiesAs part of the University of California Agriculture and Natural Resources, we serve our community by sharing research-based knowledge and sustainable gardening practices. Trained UC Master Gardener volunteers empower Tulare/Kings Counties residents…
View Site
Site - County Office

UC Cooperative Extension San Mateo & San Francisco Counties

Across California, the University of California's Cooperative Extension (UCCE) offices are local problem-solving centers and part of the UC Agriculture and Natural Resources Department. We are the bridge between local issues and the power of UC research. Our staff is part of the community; living and working…
View Site
Sacramento River
Site - County Office

Tehama County

What is UC Cooperative Extension?The University of California's 64 Cooperative Extension (UCCE) offices are local problem-solving centers. More than 400 campus-based specialists and county-based farm, home, and youth advisors work as teams to bring the University's research-based information to…
View Site
Poppys
Site

Master Gardeners of Glenn County

Our Master Gardener volunteers have completed extensive training provided by specialists from the University of California. Below are examples on how Glenn County Master Gardeners share UC research-based information with the public.
View Site
Campers and Chaperones attending 2026 Camp Keola
Site

Fresno County 4-H

4-H- The Power of Youth The 4-H Youth Development Program is an informal educational opportunity where youth, ages 5-19, learn by doing from skilled adult volunteers in project areas like science, health, agriculture, & citizenship.
View Site
Event Primary Image
Grow Cool Season Vegetables
UC Master Gardeners of Orange County: Event

Plant a Salad Bowl Garden - Westminster

Event Date
Aug 13, 2026

Want to grow greens at home, in even the smallest space?  This class will teach you about growing your own "salad bowl" garden in a small space.   Walking out to the garden, patio or balcony to pick your home grown greens for a salad is a rewarding experience.   Learning how to do it, will be…
UC Master Gardeners of Orange County
View Event
Event Primary Image
pollination ZOOM presentation
UC Master Gardeners of Orange County: Event

Build a Wildlife Habitat Zoom Encore

Event Date
Aug 10, 2026

How to bring wildlife to your garden Part of a well-balanced garden space includes having various types of wildlife in and around your garden area.   No matter the size of your garden, you can make places that many types of creatures will come to enjoy the water, food or shelter that you could be…
UC Master Gardeners of Orange County
View Event
Event Primary Image
Green, while and red humming bird at a red flower on a blue background
UC Master Gardeners of Orange County: Event

Build a Wildlife Habitat Anaheim

Event Date
Aug 9, 2026

How to bring wildlife to your garden Part of a well-balanced garden space includes having various types of wildlife in and around your garden area.   No matter the size of your garden, you can make places that many types of creatures will come to enjoy the water, food or shelter that you could be…
UC Master Gardeners of Orange County
View Event
Event Primary Image
Green and red lettuce leaves
UC Master Gardeners of Orange County: Event

Grow It Now: Cool Season Vegetables Garden Grove

Event Date
Aug 6, 2026

Cool Season Vegetables during the dog days of summer?  Yes, now is the time to start planning to begin your cool season activity.   Getting your seeds or transplants started at the right time of each season is imperative to having a successful harvest.  Join the UC Master Gardeners of Orange…
UC Master Gardeners of Orange County
View Event
Event Primary Image
Rows of potted plants at a California nursery
Cooperative Extension Ventura County: Event

Nursery and Floriculture Industry Meeting

Event Date
Aug 18, 2026

Speaker: Emma Volk, Production Horticulture Advisor @ UC Cooperative ExtensionTopic: Volk will share results from ongoing western flower thrips IPM research, as well as information on the aloe thrips invasive pest.Register HereFunding for this meeting is provided by the Thelma Hansen Competitive Grant…
Cooperative Extension Ventura County
View Event
California Institute for Water Resources: Page

Watershed Resilience Series

WISER  ›  Extension Materials & Guides  ›  Watershed Resilience SeriesScience-Based Resources for Resilient WatershedsClear, practical, and science-based resources that help people understand how watersheds work, why they matter, and how we can strengthen their resilience.Developed…
View Page
Primary Image
kaolin spray for sunburn protection
Topics in Subtropics: Article

Orchard Heat Manipulation

July 28, 2026
By Ben A Faber
Heatwaves above 95 °F are showing up more often in citrus and avocado growing areas, pushing fruit surface temperatures to the point of damage along with damage to leaves and the canopy. Sunburn is no longer a rare problem: in avocado, for example, repeated hot, clear days can quickly lead to severe…
View Article