UCCE Livestock Antimicrobial Stewardship

Lessons Learnt

 

A Natural Solution for California's Herds: African Catfish Peptides

California's cattle producers and agricultural communities are all too familiar with the rising challenge of antibiotic resistance, making common bacterial infections harder to treat in livestock. But imagine a future where we could tackle these infections with a natural, powerful alternative. Our research points to just that: antimicrobial peptides (AMPs) found in African catfish.

We're really excited about these peptides because African catfish thrive in pathogen-rich freshwater, naturally producing these robust immune compounds in their skin mucus as a defense. This natural origin makes them highly appealing alternatives to synthetic drugs.

Predicted Safety and Potent Action

One of the most compelling aspects of these AMPs is their predicted safety for mammals. Our initial computer analyses suggest that various catfish AMPs are generally recognized as safe (GRAS). We predict they'll be absorbed in the human intestine without causing liver, brain, or heart toxicity. Furthermore, lab tests on a promising peptide, NACAP-II, confirmed it was non-hemolytic, meaning it didn't damage rabbit red blood cells—a strong indicator of its potential safety for mammalian cells.

Beyond safety, these peptides demonstrate effectiveness against problematic bacteria. One study revealed NACAP-II's strong activity against Extended-Spectrum Beta-Lactamase (ESBL)-producing Escherichia coli—a critical concern for both animal and human health due to its resistance to many common antibiotics. Another peptide, ACAP-IV, also showed antibacterial activity against E. coli and Staphylococcus aureus. We believe these AMPs work by directly disrupting bacterial cell membranes, a mechanism that makes it harder for bacteria to develop resistance compared to how they resist traditional antibiotics.

 

The Path Forward

While these findings are very promising, we want to emphasize that this research is still in its early, laboratory stages. A key challenge we've identified is that some of these peptides have a high molecular weight, which might hinder their absorption if given orally. This means our future work will need to explore advanced delivery methods, potentially involving nanotechnology, or modify the peptides for better absorption and accumulation where they're needed most. Ultimately, more studies are essential to confirm their effectiveness and safety in living animals, such as cattle, and to develop strategies for large-scale production.

 

From Our Lab to Your Farm: Smarter Strategies for Antimicrobial Resistance

As fellow researchers who have been studying antimicrobial resistance (AMR) in California dairy cattle, we want to share some important insights from our recent work. Our studies highlight that while we don't focus on new types of drugs to replace antibiotics, the most critical "alternative" is actually smarter, more targeted management and a deep understanding of pathogen behavior on your farm. This approach aims to reduce the need for antibiotics or minimize the development and spread of resistance when antibiotics are necessary.

Identification, Synthesis, and In Vitro Activities of Antimicrobial Peptide from African Catfish against the Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli

 

 

 

Tackling Resistant Salmonella in Cull Cows

First, we've found that Salmonella in cull dairy cows, which contribute to the ground beef supply, often carries resistance to important antimicrobials like tetracyclines, ampicillin, and even ceftriaxone—a drug critical for human medicine. This is definitely a concern for public health. Our research shows that certain cow-level factors, such as prior antimicrobial treatment or culling due to lameness, are associated with higher odds of isolating resistant Salmonella. Conversely, culling a cow due to low milk production was associated with lower odds of resistance.

 

At the herd level, factors like the number of milking cows and monthly culling rates can also influence the presence of resistant Salmonella. This suggests that improving timely culling decisions—removing cows with mild disease problems before they escalate and require extensive antimicrobial therapy—could be an economical way to reduce the selection pressure for AMR. We also need to investigate specific reasons for culling, especially lameness, to understand its link to resistance.

 

Unpacking Mastitis: The Importance of Specificity

Second, regarding mastitis, we've extensively characterized Coagulase-negative Staphylococcus (CNS) species, which are the most common cause of intra-mammary infections (IMI). Historically, these have often been grouped into one class for convenience, or sometimes left untreated. However, our findings reveal a diverse range of different CNS species circulating on US dairies, with Staphylococcus chromogenes and Staphylococcus haemolyticus being the most prevalent. We've seen evidence of persistent subclinical infections, especially with S. chromogenes and S. simulans, where identical strains were isolated from the same udder quarter over consecutive sampling stages.

 

Our message here is that a better understanding of these specific CNS species and their genetic diversity is crucial for improved management and treatment outcomes. Instead of blanket approaches, identifying the predominant species on your farm can guide species-specific control strategies, including targeted treatment decisions to eliminate persistent infections and improvements in milking practices like teat dipping. This precise identification, perhaps through rapid and low-cost diagnostic tests, is a key step to managing mastitis effectively while minimizing broad-spectrum antibiotic use. The low number of clinical mastitis cases from CNS suggests they mainly cause subclinical chronic infections, reinforcing the need for targeted strategies.

 

Calves and Antibiotic Use: A Clear Connection

Finally, our work with pre-weaned dairy calves shows a direct link between antibiotic use and the rise of resistance. We observed that administering ceftiofur as a systemic injection or feeding neomycin-supplemented milk replacer to calves leads to an increased concentration of resistant Enterobacteriaceae in their feces. The peak of ceftiofur resistance occurred around three to four days after treatment, with levels decreasing to below pre-treatment levels by seven to eight days post-treatment. Similarly, neomycin resistance increased during administration and then decreased once the antibiotic was discontinued.

 

This clearly illustrates that AMR is acquired during treatment and can be lost when antimicrobial pressure is removed. This finding strongly supports the importance of prudent antimicrobial stewardship. While antibiotics are sometimes necessary, minimizing their use, especially extra-label use or prophylactic feeding where not strictly justified, can help preserve their effectiveness for when they are truly needed. Initial resistance observed in calves might also be linked to residual antibiotics in colostrum or environmental bacteria ingested by the calves.

 

The Real "Alternatives" are Smart Choices

In summary, the "alternatives" we emphasize aren't necessarily new medications, but rather strategic management decisions. This includes timely culling, species-specific diagnostics for mastitis, and responsible, prudent use of antibiotics in calves, all aimed at reducing the overall selection pressure for antimicrobial resistance on your dairy.

 

What specific management practices are you currently implementing to address antibiotic resistance on your farm?

 

Based on

  1. Molecular epidemiology of coagulase-negative Staphylococcus species isolated at different lactation stages from dairy cattle in the United States
  2. Association between herd management practices and antimicrobial resistance in Salmonella spp. from cull dairy cattle in Central California
  3. Estimating the Rates of Acquisition and loss of Resistance of Enterobacteriaceae to Antimicrobial Drugs in Pre-Weaned Dairy Calves

Our Research: Guiding California Dairies in the Fight Against Antimicrobial Resistance

As California dairy owners and farmers, our research provides crucial insights into managing antimicrobial resistance (AMR) on our operations. We want to emphasize the importance of judicious antibiotic use and strong stewardship practices to maintain herd health and preserve the effectiveness of these vital medicines.

Understanding Resistance Patterns in Your Herd

Our findings reveal important patterns of antimicrobial resistance in common bacteria (Escherichia coli and Enterococcus/Streptococcus spp.) found in the fecal samples of adult dairy cows across California. We observed very low resistance to several drugs commonly given to adult dairy cows, such as cephalosporins and penicillins. This tells us that these particular drugs remain effective when used appropriately.

However, we detected higher rates of AMR to drugs that aren't approved for use in lactating dairy cattle over months of age, including florfenicol, tildipirosin, tilmicosin, and tiamulin. The high resistance to florfenicol, for instance—a drug typically used in beef cattle or non-lactating dairy cattle and calves—might be linked to co-selection with other resistance genes or how resistance spreads between bacteria. These results truly underscore the importance of sticking to labeled drug uses and understanding how resistance can develop even to drugs not directly used in adult lactating cows.

Regional Differences and Management Impacts

We also identified significant differences in AMR across California's dairy regions and seasons. For instance, E. coli isolates from Northern California showed lower resistance to certain antibiotics like ceftiofur compared to the Northern San Joaquin Valley and Greater Southern California. We believe this difference is related to regional variations in management practices and how antibiotics are used, especially for mastitis prevention and treatment. It's noteworthy that some dairies in Northern California didn't use antibiotics for mastitis treatment or prevention, which contributed to lower AMR in those areas. This really suggests that management practices that reduce the overall need for antibiotic treatments can play a significant role in bringing down AMR. The seasonal variations we observed, with higher resistance often seen in winter for E. coli isolates, could be attributed to weather conditions that favor bacterial growth and increase disease, potentially leading to more antibiotic use.

The Dynamics of Antibiotic Treatment and Resistance

Our in-depth study on the dynamics of ceftiofur resistance further highlights the impact of antibiotic treatments. We found that while systemic ceftiofur treatment leads to a rapid increase in resistant Enterobacteriaceae, these levels typically return to pre-treatment baselines within a few days. However, populations of sensitive bacteria can remain suppressed for a longer period. We even observed a cyclical re-emergence of resistance, though at diminishing levels, possibly due to complex interactions within the gut bacteria. These dynamics are critical for us to consider for future AMR surveillance and when designing treatment strategies.

The Path Forward: Stewardship and Smart Choices

In summary, our research emphasizes that while we weren't focused on entirely new non-antibiotic products, the most important "alternative" approach to combating AMR on our dairies is through robust antibiotic stewardship and judicious use. This means making informed decisions in consultation with your veterinarians, selecting antibiotics based on known resistance patterns, adhering strictly to approved drug labels and treatment protocols, and, crucially, implementing best management practices that reduce the incidence of diseases requiring antibiotic intervention in the first place. By doing so, we can help ensure that the antibiotics we rely on for animal health remain effective for generations to come.

 

 

Master Food Preserver Canning Workshop
Site - County Program

UC Master Food Preservers of Humboldt & Del Norte Counties

Preserve today, relish tomorrowThe Humboldt and Del Norte Master Food Preserver Program uses research-based methods for food preservation and food safety. We teach easy and safe canning, pickling, fermenting, freezing, and dehydrating practices.Are you on our mailing list?Provide your information to be…
View Site
Primary Image
Flagging Fescue Variety Trial With Smoke Blocking the Sun
Blog

The Disaster Blog

 Welcome to the UCANR Disaster Blog!From 1980 to 2024, California declared 391 disasters ranging from wildfire to drought, severe storms, flooding, and high winds. 46 of those disasters resulted in $1B or more in damages. Californians are now estimated to be impacted by at least 1 major disaster or…
View Blog
Strawberry harvesting robot demonstration at Hansen Agricultural Research and Extension Center
Site

UC ANR Innovate

UC ANR Innovate connects people, ideas, and resources to move agricultural innovation from research to adoption across California.
View Site
Collage - Alt Main Page (2000 x 400) (2).png
Site

Intellectual Property and Technology Transfer

UC ANR Launches IP Management and SupportThe University of California Agriculture & Natural Resources (UC ANR) is committed to best practices in intellectual property and technology transfer. As part of our mission to ensure that the discoveries and innovations emerging from UC ANR research and outreach…
View Site
almond blossoms
Site

Sample IWP Site

Explore UC ANR’s formatting guide: see headings, text, and layout examples, plus tips on best practices for clean, effective site design.
View Site
UC ANR academics, staff and volunteers in a collage grid
Site

About Us

UC Agriculture and Natural Resources delivers science-based solutions, partnerships, and expertise across all 58 California counties in agriculture, natural resources, wildfire resilience, environmental stewardship, nutrition, and community development.
View Site
common house fly - musca domestica
Site

FlySpotter©

House FliesHouse flies can be considerable nuisance pests as well as carriers of animal and human pathogens.  Management of house flies (Musca domestica) is an important part of any animal operation and an Integrated Pest Management (IPM) program for house flies is recommended.  An effective IPM…
View Site
oak woodlands spring
Site

UC Oaks

UC Oaks provides science-based information on the ecology and stewardship of California's oak woodlands. UC Oaks is also a repository of 24 years of science-based research and outreach conducted from 1986 to 2010 by the UC Integrated Hardwood Range Management Program (IHRMP), a collaboration among the…
View Site
Monterey County
Site - County Program

4-H in Monterey County

 Welcome to 4-H!  The University of California 4-H Youth Development Program is administered by UC Cooperative Extension Offices and promotes hands-on, experiential learning for all youth ages 5-19. Youth members and adult volunteers from all backgrounds and locations are welcome. …
View Site
Primary Image
California rangeland
Blog

On the Range

Featuring research updates and educational events for ranchers and other land stewards in Sonoma and Marin counties. Blog managed by UCCE Livestock and Natural Resources Advisor Devii Rao. 
View Blog
Primary Image
Professor Fran Keller interacting with visitors at the Bohart Museum of Entomology.

Pacific Coast Entomological Society to Meet at UC Davis

January 20, 2026
 If you're interested in joining the Pacific Coast Entomological Society (PCES), the first meeting of the year will be Saturday, Jan. 24 at 1 p.m. in Room 122 of Briggs Hall, University of California, Davis. Following the meeting, the group will gather at the Bohart Museum of Entomology to learn…
View Article
Primary Image
saucy chicken wings on a plate
UC Master Food Preservers of Central Sierra: Article

Central Sierra: Wing Sauce to Enjoy During Football and All Year Round

January 20, 2026
Preserve It! Chicken Wing Season! The Super Bowl always means there is a grand feast of snack foods to plan and prepare. While the textures and flavors abound at this annual gathering (whether you watch the game or not), it seems a quintessential ingredient on the menu is the spicy-vinegary buffalo…
View Article
Primary Image
two small pears on a wood board
UC Master Food Preservers of Central Sierra: Article

Central Sierra: Canned Tiny Seckel Pears Make Delicious Treat!

January 20, 2026
Preserve It! For a Lofty Dessert!  Seckel pears are crisp, juicy, and quite sweet with a slightly spicy flavor profile when ripe. They are very small in size (about one-inch diameter and three-inches in height – about the size of a small lemon), making them perfect for canning beautiful halves of…
View Article
Primary Image
a red rose closeup
UC Master Gardeners of El Dorado County: Article

Central Sierra: From Now Til March, It's Time to Prune Your Roses

January 20, 2026
An Invitation to Garden Beauty: A Rose Pruning Primer  It’s that pruning time of year! The period from Christmas until early March (depending on elevation) is the best time to get started. Your bushes will look more attractive and produce larger flowers with good pruning, and you can shape them to the…
View Article
Event Primary Image
A man holding a sample go a Goldspotted Oak Borer
Cooperative Extension Ventura County: Event

GSOB Blitz in Ventura County

Event Date
Feb 13, 2026

Register Today! GSOB Blitz in Ventura CountySanta Susana Park & Railroad - Simi Valley Santa Susana Park & Railroad Google MapFebruary 13, 2026, 10:30 AM - 2:00 PM What’s a GSOB Blitz?A GSOB Blitz is a community-powered effort to detect and map goldspotted oak borer infestations. With…
Cooperative Extension Ventura County
View Event
Cooperative Extension, Sutter-Yuba Counties: Event

Rice Production Workshop

Event Date
Mar 18, 2026 - Mar 19, 2026

Rice Production WorkshopAn in-depth workshop that covers the principles and practices of rice production in CaliforniaRegistration required! Please click here to complete the survey: 2026 Rice Production Workshop RegistrationAgenda Coming Soon!Date: March 18th and 19th, 2026Time: 8:30 AM -3 PMLocation:…
Cooperative Extension, Sutter-Yuba Counties
View Event

Matilda and Matthew, A Love Story

January 20, 2026
Blog by Lisa Rico This last summer, I befriended a praying mantis. Confession, they were not my favorite. Besides being a bit freaky looking, they eat things I don’t want them to eat. For example, I had one that lived in my artichoke plant and would literally “hang out” near the flower, just waiting for…
View Article
Primary Image
Several large, brilliant purple flowers scattered over dense, deep green leaves.
Pests in the Urban Landscape: Article

When Ornamentals Escape

January 20, 2026
By Cherie Shook
You might be surprised to learn that a few of your favorite ornamental plants are invasive to California and can “escape” your yard causing big problems in the wild. When plants escape landscape and garden boundaries, it is often due to seed distribution or aggressive roots. An invasive plant species can…
View Article

Webinar Series for Both New and Established Organic Growers

January 20, 2026
Haga clic aquí para ver la traducción al español. Join UC SAREP and collaborators this winter for two webinar series developed specifically for organic producers. Whether you have been farming organically for decades or just getting started with organic production practices, you’ll find sessions…
View Article