UCCE Livestock Antimicrobial Stewardship

Lessons Learnt

 

A Natural Solution for California's Herds: African Catfish Peptides

California's cattle producers and agricultural communities are all too familiar with the rising challenge of antibiotic resistance, making common bacterial infections harder to treat in livestock. But imagine a future where we could tackle these infections with a natural, powerful alternative. Our research points to just that: antimicrobial peptides (AMPs) found in African catfish.

We're really excited about these peptides because African catfish thrive in pathogen-rich freshwater, naturally producing these robust immune compounds in their skin mucus as a defense. This natural origin makes them highly appealing alternatives to synthetic drugs.

Predicted Safety and Potent Action

One of the most compelling aspects of these AMPs is their predicted safety for mammals. Our initial computer analyses suggest that various catfish AMPs are generally recognized as safe (GRAS). We predict they'll be absorbed in the human intestine without causing liver, brain, or heart toxicity. Furthermore, lab tests on a promising peptide, NACAP-II, confirmed it was non-hemolytic, meaning it didn't damage rabbit red blood cells—a strong indicator of its potential safety for mammalian cells.

Beyond safety, these peptides demonstrate effectiveness against problematic bacteria. One study revealed NACAP-II's strong activity against Extended-Spectrum Beta-Lactamase (ESBL)-producing Escherichia coli—a critical concern for both animal and human health due to its resistance to many common antibiotics. Another peptide, ACAP-IV, also showed antibacterial activity against E. coli and Staphylococcus aureus. We believe these AMPs work by directly disrupting bacterial cell membranes, a mechanism that makes it harder for bacteria to develop resistance compared to how they resist traditional antibiotics.

 

The Path Forward

While these findings are very promising, we want to emphasize that this research is still in its early, laboratory stages. A key challenge we've identified is that some of these peptides have a high molecular weight, which might hinder their absorption if given orally. This means our future work will need to explore advanced delivery methods, potentially involving nanotechnology, or modify the peptides for better absorption and accumulation where they're needed most. Ultimately, more studies are essential to confirm their effectiveness and safety in living animals, such as cattle, and to develop strategies for large-scale production.

 

From Our Lab to Your Farm: Smarter Strategies for Antimicrobial Resistance

As fellow researchers who have been studying antimicrobial resistance (AMR) in California dairy cattle, we want to share some important insights from our recent work. Our studies highlight that while we don't focus on new types of drugs to replace antibiotics, the most critical "alternative" is actually smarter, more targeted management and a deep understanding of pathogen behavior on your farm. This approach aims to reduce the need for antibiotics or minimize the development and spread of resistance when antibiotics are necessary.

Identification, Synthesis, and In Vitro Activities of Antimicrobial Peptide from African Catfish against the Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli

 

 

 

Tackling Resistant Salmonella in Cull Cows

First, we've found that Salmonella in cull dairy cows, which contribute to the ground beef supply, often carries resistance to important antimicrobials like tetracyclines, ampicillin, and even ceftriaxone—a drug critical for human medicine. This is definitely a concern for public health. Our research shows that certain cow-level factors, such as prior antimicrobial treatment or culling due to lameness, are associated with higher odds of isolating resistant Salmonella. Conversely, culling a cow due to low milk production was associated with lower odds of resistance.

 

At the herd level, factors like the number of milking cows and monthly culling rates can also influence the presence of resistant Salmonella. This suggests that improving timely culling decisions—removing cows with mild disease problems before they escalate and require extensive antimicrobial therapy—could be an economical way to reduce the selection pressure for AMR. We also need to investigate specific reasons for culling, especially lameness, to understand its link to resistance.

 

Unpacking Mastitis: The Importance of Specificity

Second, regarding mastitis, we've extensively characterized Coagulase-negative Staphylococcus (CNS) species, which are the most common cause of intra-mammary infections (IMI). Historically, these have often been grouped into one class for convenience, or sometimes left untreated. However, our findings reveal a diverse range of different CNS species circulating on US dairies, with Staphylococcus chromogenes and Staphylococcus haemolyticus being the most prevalent. We've seen evidence of persistent subclinical infections, especially with S. chromogenes and S. simulans, where identical strains were isolated from the same udder quarter over consecutive sampling stages.

 

Our message here is that a better understanding of these specific CNS species and their genetic diversity is crucial for improved management and treatment outcomes. Instead of blanket approaches, identifying the predominant species on your farm can guide species-specific control strategies, including targeted treatment decisions to eliminate persistent infections and improvements in milking practices like teat dipping. This precise identification, perhaps through rapid and low-cost diagnostic tests, is a key step to managing mastitis effectively while minimizing broad-spectrum antibiotic use. The low number of clinical mastitis cases from CNS suggests they mainly cause subclinical chronic infections, reinforcing the need for targeted strategies.

 

Calves and Antibiotic Use: A Clear Connection

Finally, our work with pre-weaned dairy calves shows a direct link between antibiotic use and the rise of resistance. We observed that administering ceftiofur as a systemic injection or feeding neomycin-supplemented milk replacer to calves leads to an increased concentration of resistant Enterobacteriaceae in their feces. The peak of ceftiofur resistance occurred around three to four days after treatment, with levels decreasing to below pre-treatment levels by seven to eight days post-treatment. Similarly, neomycin resistance increased during administration and then decreased once the antibiotic was discontinued.

 

This clearly illustrates that AMR is acquired during treatment and can be lost when antimicrobial pressure is removed. This finding strongly supports the importance of prudent antimicrobial stewardship. While antibiotics are sometimes necessary, minimizing their use, especially extra-label use or prophylactic feeding where not strictly justified, can help preserve their effectiveness for when they are truly needed. Initial resistance observed in calves might also be linked to residual antibiotics in colostrum or environmental bacteria ingested by the calves.

 

The Real "Alternatives" are Smart Choices

In summary, the "alternatives" we emphasize aren't necessarily new medications, but rather strategic management decisions. This includes timely culling, species-specific diagnostics for mastitis, and responsible, prudent use of antibiotics in calves, all aimed at reducing the overall selection pressure for antimicrobial resistance on your dairy.

 

What specific management practices are you currently implementing to address antibiotic resistance on your farm?

 

Based on

  1. Molecular epidemiology of coagulase-negative Staphylococcus species isolated at different lactation stages from dairy cattle in the United States
  2. Association between herd management practices and antimicrobial resistance in Salmonella spp. from cull dairy cattle in Central California
  3. Estimating the Rates of Acquisition and loss of Resistance of Enterobacteriaceae to Antimicrobial Drugs in Pre-Weaned Dairy Calves

Our Research: Guiding California Dairies in the Fight Against Antimicrobial Resistance

As California dairy owners and farmers, our research provides crucial insights into managing antimicrobial resistance (AMR) on our operations. We want to emphasize the importance of judicious antibiotic use and strong stewardship practices to maintain herd health and preserve the effectiveness of these vital medicines.

Understanding Resistance Patterns in Your Herd

Our findings reveal important patterns of antimicrobial resistance in common bacteria (Escherichia coli and Enterococcus/Streptococcus spp.) found in the fecal samples of adult dairy cows across California. We observed very low resistance to several drugs commonly given to adult dairy cows, such as cephalosporins and penicillins. This tells us that these particular drugs remain effective when used appropriately.

However, we detected higher rates of AMR to drugs that aren't approved for use in lactating dairy cattle over months of age, including florfenicol, tildipirosin, tilmicosin, and tiamulin. The high resistance to florfenicol, for instance—a drug typically used in beef cattle or non-lactating dairy cattle and calves—might be linked to co-selection with other resistance genes or how resistance spreads between bacteria. These results truly underscore the importance of sticking to labeled drug uses and understanding how resistance can develop even to drugs not directly used in adult lactating cows.

Regional Differences and Management Impacts

We also identified significant differences in AMR across California's dairy regions and seasons. For instance, E. coli isolates from Northern California showed lower resistance to certain antibiotics like ceftiofur compared to the Northern San Joaquin Valley and Greater Southern California. We believe this difference is related to regional variations in management practices and how antibiotics are used, especially for mastitis prevention and treatment. It's noteworthy that some dairies in Northern California didn't use antibiotics for mastitis treatment or prevention, which contributed to lower AMR in those areas. This really suggests that management practices that reduce the overall need for antibiotic treatments can play a significant role in bringing down AMR. The seasonal variations we observed, with higher resistance often seen in winter for E. coli isolates, could be attributed to weather conditions that favor bacterial growth and increase disease, potentially leading to more antibiotic use.

The Dynamics of Antibiotic Treatment and Resistance

Our in-depth study on the dynamics of ceftiofur resistance further highlights the impact of antibiotic treatments. We found that while systemic ceftiofur treatment leads to a rapid increase in resistant Enterobacteriaceae, these levels typically return to pre-treatment baselines within a few days. However, populations of sensitive bacteria can remain suppressed for a longer period. We even observed a cyclical re-emergence of resistance, though at diminishing levels, possibly due to complex interactions within the gut bacteria. These dynamics are critical for us to consider for future AMR surveillance and when designing treatment strategies.

The Path Forward: Stewardship and Smart Choices

In summary, our research emphasizes that while we weren't focused on entirely new non-antibiotic products, the most important "alternative" approach to combating AMR on our dairies is through robust antibiotic stewardship and judicious use. This means making informed decisions in consultation with your veterinarians, selecting antibiotics based on known resistance patterns, adhering strictly to approved drug labels and treatment protocols, and, crucially, implementing best management practices that reduce the incidence of diseases requiring antibiotic intervention in the first place. By doing so, we can help ensure that the antibiotics we rely on for animal health remain effective for generations to come.

 

 

Primary Image
Tattered Gulf Fritillary on Passiflora. Its last flight.

Wings Up? Not This Time

July 1, 2026
By Kathy Keatley Garvey
 The Gulf Fritillary is surprisingly resilient-- except when it's not.Yesterday we spotted a crippled, tattered and faded Gulf Frit, Agraulis vanillae, lying almost motionless on its host plant, the passionflower vine, Passiflora.It was apparently a victim of a predator. Maybe a bird? A praying mantis?…
View Article
Event Primary Image
Fall & WInter Vegetables in a Basket
UC Master Gardeners • Napa County: Event

Fall & Winter Vegetables - Napa

Event Date
Aug 15, 2026

UC Napa County Master Gardeners present a hands-on workshop for growing cool season vegetables. Learn which vegetables thrive in cool or even cold weather, and when to plant for a harvest in fall, winter, or early spring. It’s all about timing. We will also discuss soil management and dealing with common…
UC Master Gardeners • Napa County
View Event

Summer Pests and Frost Impact Klamath Basin Crops

July 1, 2026
By Robert G Wilson
by Rob Wilson, IREC Agronomy and Pest Management AdvisorOver the last week, IREC staff have observed several pests in winter and spring grain crops.  Most wheat and barley fields at IREC have populations of cereal leaf beetle, aphids, and armyworms.  Fortunately, most winter wheat and barley fields…
View Article
Fresno County 4-H: Article

June-July 2026 Newsletter

July 1, 2026
By Elizabeth Ramirez
A new issue of our Fresno County newsletter is now available....In This Edition… 2- Committee & Council Mtgs. 2- Clover Fest Winner 2- Project Leader Plans 3- Livestock Kahoots 3- Livestock Ach Results 3- ZSuite Tips 4- 4-H Sheep and Goat Show 4- Trap and Skeet Results 5- Clover Fest Event Results 6-…
View Article
Primary Image
Figure 3. Dr. Li Wang, lead development scientist at the West Biofuels R&D facility, explaining the design of its gasification system
UCCE Central Sierra: Article

Exploring Biomass Utilization Pathways with West Biofuels

July 1, 2026
By Cindy X Chen
In April 2026, under the coordination of Woody Biomass and Forest Products Advisor, Dr. Cindy Chen, a team from University of California Agriculture and Natural Resources (UC ANR) had the opportunity to tour the facilities of West Biofuels — its Hat Creek Bioenergy Plant in Burney and the Research and…
View Article
UCCE Central Sierra: Article

Region 6 4-H: Project Leader Kick-Off Events Happening in July

July 1, 2026
By JoLynn C Miller
June 30 was the last day of the 2025-2026 program year for 4-H. There are still a few events happening in July as a culmination of last year’s program, like camp in El Dorado and fair in Tuolumne and Amador. As many of our youth are wrapping up and reminiscing on the memories they’ve made and lessons they’ve…
View Article
UC Master Gardeners of Calaveras County: Event

UC Master Gardeners of Calaveras County: Summer Open Garden Days

Event Date
Jul 2, 2026 - Oct 29, 2026

Calaveras County Demonstration GardenSUMMER HOURS: Thursdays | 9:00AM - 1:00PM Hoo boy, the hot stuff has arrived for real, hasn't it? Perhaps like us you are upping your watering routines to keep up with all the thirsty plants. The garden is thriving, abuzz with life and activity. We hope you'll…
UC Master Gardeners of Calaveras County
View Event
UC Cooperative Extension Imperial County: Article

July/August 2026 - Ag. Briefs

July 1, 2026
By Jennifer L De La Fuente
EVALUATING SUMMER IRRIGATION CUTOFF AND HARVEST TIMING IN IMPERIAL VALLEY ALFALFA RESOURCES FOR NEW WORLD SCREWWORM UPDATES AND ENTRY REQUIREMENTS TO CALIFORNIA FOR ANIMALSIMPERIAL VALLEY CIMIS REPORT AND UC WATER MANAGEMENT RESOURCES        
View Article
Event Primary Image
Spiral in the garden include snails, sunflowers & cones
UC Master Gardeners of Fresno County: Event

Discovering Spirals in our Gardens

Event Date
Aug 27, 2026

DISCOVERING SPIRALS IN OUR GARDENS This month’s topic is spirals in our gardens. Join us as we discover the fascinating spiral shapes hidden  throughout nature and learn why this pattern is so important in the natural world.  Enjoy hands-on activities, close-up observations, and a fun garden…
UC Master Gardeners of Fresno County
View Event