Garden Notes
Article

Offenses in the Garden That Trees (and Shrubs) Can’t Forgive

Sherida Phibbs, UC Master Gardener

Tree in a yard that has been badly pruned

Recently, my quiet neighborhood became an unintended classroom in what not to do with trees. In a short time, several neighbors made choices that seriously harmed mature trees—whether by topping, removing, or poorly pruning them. Watching these beautiful shade trees lose half their canopy or disappear altogether was heartbreaking. It’s a reminder that while trees grow slowly over decades, they can be damaged in moments, sometimes unknowingly.

This article aims to share key insights about common mistakes homeowners make in caring for their landscapes. With a better understanding, anyone can avoid these frequent errors and help their trees thrive, adding lasting beauty and value to their homes.

The Danger of Topping

Topping—cutting off large portions of a tree’s upper branches—is one of the most damaging pruning mistakes. Though often done to control size or reduce risk, it actually weakens tree structure and invites long-term problems. Topped trees respond by sending out water sprouts: fast-growing but fragile branches prone to breaking. Large wounds also reduce energy reserves and invite decay. The better alternative is crown reduction or selective structural pruning, which keeps trees healthy and stable. If pruning is intimidating, consider hiring a certified arborist. Learn more: Topping Trees Is Harmful

Avoid Over-Pruning

Removing more than 25% of a tree’s canopy in one year severely stresses it. Over-pruned trees expend vital resources growing weak new shoots and become vulnerable to storm damage and disease. Pruning should focus on removing dead or crossed branches and maintaining structural integrity—not just thinning. Learn more: Overpruned Trees

Planting at the Right Depth

Planting too deep is a silent killer of many new trees. When the root flare is buried beneath the soil, roots can suffocate or circle the trunk, slowly strangling the tree. To avoid this, plant so the root flare is visible above the soil surface. Learn more: Proper Tree Planting and Tree Planting Notes

Protect the Trunk Zone

Planting flowers or shrubs too close to a tree’s trunk traps moisture, damages bark, and restricts necessary air exchange. Maintaining a 12- to 18-inch clear zone around the trunk and spreading mulch lightly (without piling it against bark) protects the tree’s health. Learn more: Underplanting Trees

Water Wisely

Watering at the base of the trunk does little good, as most absorbing roots extend well beyond the canopy edge. Water deeply and slowly in a ring just outside the drip line to effectively hydrate the root system and reduce disease risk.

Learn more: Preparing Trees for Winter and Proper Irrigation Practices

Skip Landscape Fabric

Although tempting to use as a weed barrier, landscape fabric restricts air and water movement to roots, leading to shallow, stressed root systems and poor soil health. Organic mulch is a better choice, allowing the soil to breathe and support microbial life. Learn more: Disadvantages of Landscape Fabric

Prune at the Right Time

Proper timing is key to pruning success. Pruning spring-blooming shrubs in winter removes their flower buds, and late-season pruning encourages tender growth vulnerable to frost. Generally, prune spring bloomers right after they have finished flowering, and summer bloomers in late winter or early spring. Pruning should never be done in the summer for most trees and shrubs. Learn more: Fall Pruning

Make Proper Pruning Cuts

Cut branches just outside the branch collar using the three-cut method to avoid tearing the bark. Proper cuts help the tree heal quickly and ward off decay; wound sealants are unnecessary. Learn more: Pruning Cuts

Avoid Volcano Mulching

Mulch piled high against a trunk holds moisture against the bark, causing rot and inviting pests. Spread mulch to 3 to 4 inches deep, keeping it several inches away from the trunk for healthy growth. Learn more: Proper Mulching

Care for Young Trees

Newly planted trees need regular, deep watering and occasional staking for the first 2 to 3 years to establish strong roots and trunks. Remove stakes as soon as the trees can support themselves. Learn more: Training and Pruning Young Trees

Space Plants Properly

Crowded plants compete for nutrients, reduce airflow, and increase disease risk. Space plants according to their mature size, not container size, for long-term success. Learn more: Give Landscape Plants Proper Space

Don’t Neglect Soil Health

Healthy soil is vital for thriving plants. Compacted or nutrient-poor soil restricts root growth and microbial activity. Promote soil health with organic mulch, compost, and gentle cultivation around roots. Learn more: Soil Health

Final Thoughts

Mistakes in the garden are part of the learning process, but repetitive errors are costly. Trees and shrubs not only beautify neighborhoods but also cool homes, clean the air, and support wildlife. Attentive care—right planting depth, thoughtful pruning, proper watering, and mulch management—can nurture healthy landscapes for decades. Understanding plants’ natural rhythms and needs, rather than trying to control them, creates resilient, thriving gardens.