UCCE Livestock Antimicrobial Stewardship

Lessons Learnt

 

A Natural Solution for California's Herds: African Catfish Peptides

California's cattle producers and agricultural communities are all too familiar with the rising challenge of antibiotic resistance, making common bacterial infections harder to treat in livestock. But imagine a future where we could tackle these infections with a natural, powerful alternative. Our research points to just that: antimicrobial peptides (AMPs) found in African catfish.

We're really excited about these peptides because African catfish thrive in pathogen-rich freshwater, naturally producing these robust immune compounds in their skin mucus as a defense. This natural origin makes them highly appealing alternatives to synthetic drugs.

Predicted Safety and Potent Action

One of the most compelling aspects of these AMPs is their predicted safety for mammals. Our initial computer analyses suggest that various catfish AMPs are generally recognized as safe (GRAS). We predict they'll be absorbed in the human intestine without causing liver, brain, or heart toxicity. Furthermore, lab tests on a promising peptide, NACAP-II, confirmed it was non-hemolytic, meaning it didn't damage rabbit red blood cells—a strong indicator of its potential safety for mammalian cells.

Beyond safety, these peptides demonstrate effectiveness against problematic bacteria. One study revealed NACAP-II's strong activity against Extended-Spectrum Beta-Lactamase (ESBL)-producing Escherichia coli—a critical concern for both animal and human health due to its resistance to many common antibiotics. Another peptide, ACAP-IV, also showed antibacterial activity against E. coli and Staphylococcus aureus. We believe these AMPs work by directly disrupting bacterial cell membranes, a mechanism that makes it harder for bacteria to develop resistance compared to how they resist traditional antibiotics.

 

The Path Forward

While these findings are very promising, we want to emphasize that this research is still in its early, laboratory stages. A key challenge we've identified is that some of these peptides have a high molecular weight, which might hinder their absorption if given orally. This means our future work will need to explore advanced delivery methods, potentially involving nanotechnology, or modify the peptides for better absorption and accumulation where they're needed most. Ultimately, more studies are essential to confirm their effectiveness and safety in living animals, such as cattle, and to develop strategies for large-scale production.

 

From Our Lab to Your Farm: Smarter Strategies for Antimicrobial Resistance

As fellow researchers who have been studying antimicrobial resistance (AMR) in California dairy cattle, we want to share some important insights from our recent work. Our studies highlight that while we don't focus on new types of drugs to replace antibiotics, the most critical "alternative" is actually smarter, more targeted management and a deep understanding of pathogen behavior on your farm. This approach aims to reduce the need for antibiotics or minimize the development and spread of resistance when antibiotics are necessary.

Identification, Synthesis, and In Vitro Activities of Antimicrobial Peptide from African Catfish against the Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli

 

 

 

Tackling Resistant Salmonella in Cull Cows

First, we've found that Salmonella in cull dairy cows, which contribute to the ground beef supply, often carries resistance to important antimicrobials like tetracyclines, ampicillin, and even ceftriaxone—a drug critical for human medicine. This is definitely a concern for public health. Our research shows that certain cow-level factors, such as prior antimicrobial treatment or culling due to lameness, are associated with higher odds of isolating resistant Salmonella. Conversely, culling a cow due to low milk production was associated with lower odds of resistance.

 

At the herd level, factors like the number of milking cows and monthly culling rates can also influence the presence of resistant Salmonella. This suggests that improving timely culling decisions—removing cows with mild disease problems before they escalate and require extensive antimicrobial therapy—could be an economical way to reduce the selection pressure for AMR. We also need to investigate specific reasons for culling, especially lameness, to understand its link to resistance.

 

Unpacking Mastitis: The Importance of Specificity

Second, regarding mastitis, we've extensively characterized Coagulase-negative Staphylococcus (CNS) species, which are the most common cause of intra-mammary infections (IMI). Historically, these have often been grouped into one class for convenience, or sometimes left untreated. However, our findings reveal a diverse range of different CNS species circulating on US dairies, with Staphylococcus chromogenes and Staphylococcus haemolyticus being the most prevalent. We've seen evidence of persistent subclinical infections, especially with S. chromogenes and S. simulans, where identical strains were isolated from the same udder quarter over consecutive sampling stages.

 

Our message here is that a better understanding of these specific CNS species and their genetic diversity is crucial for improved management and treatment outcomes. Instead of blanket approaches, identifying the predominant species on your farm can guide species-specific control strategies, including targeted treatment decisions to eliminate persistent infections and improvements in milking practices like teat dipping. This precise identification, perhaps through rapid and low-cost diagnostic tests, is a key step to managing mastitis effectively while minimizing broad-spectrum antibiotic use. The low number of clinical mastitis cases from CNS suggests they mainly cause subclinical chronic infections, reinforcing the need for targeted strategies.

 

Calves and Antibiotic Use: A Clear Connection

Finally, our work with pre-weaned dairy calves shows a direct link between antibiotic use and the rise of resistance. We observed that administering ceftiofur as a systemic injection or feeding neomycin-supplemented milk replacer to calves leads to an increased concentration of resistant Enterobacteriaceae in their feces. The peak of ceftiofur resistance occurred around three to four days after treatment, with levels decreasing to below pre-treatment levels by seven to eight days post-treatment. Similarly, neomycin resistance increased during administration and then decreased once the antibiotic was discontinued.

 

This clearly illustrates that AMR is acquired during treatment and can be lost when antimicrobial pressure is removed. This finding strongly supports the importance of prudent antimicrobial stewardship. While antibiotics are sometimes necessary, minimizing their use, especially extra-label use or prophylactic feeding where not strictly justified, can help preserve their effectiveness for when they are truly needed. Initial resistance observed in calves might also be linked to residual antibiotics in colostrum or environmental bacteria ingested by the calves.

 

The Real "Alternatives" are Smart Choices

In summary, the "alternatives" we emphasize aren't necessarily new medications, but rather strategic management decisions. This includes timely culling, species-specific diagnostics for mastitis, and responsible, prudent use of antibiotics in calves, all aimed at reducing the overall selection pressure for antimicrobial resistance on your dairy.

 

What specific management practices are you currently implementing to address antibiotic resistance on your farm?

 

Based on

  1. Molecular epidemiology of coagulase-negative Staphylococcus species isolated at different lactation stages from dairy cattle in the United States
  2. Association between herd management practices and antimicrobial resistance in Salmonella spp. from cull dairy cattle in Central California
  3. Estimating the Rates of Acquisition and loss of Resistance of Enterobacteriaceae to Antimicrobial Drugs in Pre-Weaned Dairy Calves

Our Research: Guiding California Dairies in the Fight Against Antimicrobial Resistance

As California dairy owners and farmers, our research provides crucial insights into managing antimicrobial resistance (AMR) on our operations. We want to emphasize the importance of judicious antibiotic use and strong stewardship practices to maintain herd health and preserve the effectiveness of these vital medicines.

Understanding Resistance Patterns in Your Herd

Our findings reveal important patterns of antimicrobial resistance in common bacteria (Escherichia coli and Enterococcus/Streptococcus spp.) found in the fecal samples of adult dairy cows across California. We observed very low resistance to several drugs commonly given to adult dairy cows, such as cephalosporins and penicillins. This tells us that these particular drugs remain effective when used appropriately.

However, we detected higher rates of AMR to drugs that aren't approved for use in lactating dairy cattle over months of age, including florfenicol, tildipirosin, tilmicosin, and tiamulin. The high resistance to florfenicol, for instance—a drug typically used in beef cattle or non-lactating dairy cattle and calves—might be linked to co-selection with other resistance genes or how resistance spreads between bacteria. These results truly underscore the importance of sticking to labeled drug uses and understanding how resistance can develop even to drugs not directly used in adult lactating cows.

Regional Differences and Management Impacts

We also identified significant differences in AMR across California's dairy regions and seasons. For instance, E. coli isolates from Northern California showed lower resistance to certain antibiotics like ceftiofur compared to the Northern San Joaquin Valley and Greater Southern California. We believe this difference is related to regional variations in management practices and how antibiotics are used, especially for mastitis prevention and treatment. It's noteworthy that some dairies in Northern California didn't use antibiotics for mastitis treatment or prevention, which contributed to lower AMR in those areas. This really suggests that management practices that reduce the overall need for antibiotic treatments can play a significant role in bringing down AMR. The seasonal variations we observed, with higher resistance often seen in winter for E. coli isolates, could be attributed to weather conditions that favor bacterial growth and increase disease, potentially leading to more antibiotic use.

The Dynamics of Antibiotic Treatment and Resistance

Our in-depth study on the dynamics of ceftiofur resistance further highlights the impact of antibiotic treatments. We found that while systemic ceftiofur treatment leads to a rapid increase in resistant Enterobacteriaceae, these levels typically return to pre-treatment baselines within a few days. However, populations of sensitive bacteria can remain suppressed for a longer period. We even observed a cyclical re-emergence of resistance, though at diminishing levels, possibly due to complex interactions within the gut bacteria. These dynamics are critical for us to consider for future AMR surveillance and when designing treatment strategies.

The Path Forward: Stewardship and Smart Choices

In summary, our research emphasizes that while we weren't focused on entirely new non-antibiotic products, the most important "alternative" approach to combating AMR on our dairies is through robust antibiotic stewardship and judicious use. This means making informed decisions in consultation with your veterinarians, selecting antibiotics based on known resistance patterns, adhering strictly to approved drug labels and treatment protocols, and, crucially, implementing best management practices that reduce the incidence of diseases requiring antibiotic intervention in the first place. By doing so, we can help ensure that the antibiotics we rely on for animal health remain effective for generations to come.

 

 

Primary Image
Coyote Hills - East Bay
Blog

UCCE East Bay

UCCE East Bay highlights the work that Cooperative Extension does across the San Francisco East Bay comprising the counties of Alameda and Contra Costa primarily. It provides content relevant to this geography across programmatic areas in nutrition and health education, urban ag, environmental horticulture,…
View Blog
Site

Coast Redwood Science Symposium - 2016

The General Technical Report PSW 258 "Proceedings of the Coast Redwood Science Symposium2016" is now available for viewing and/or printing. Download a PDF of the report by clicking here.
View Site
Site

UC ANR Statewide Conference 2023

Monday-Thursday, April 24-27, 2023 Fresno DoubleTree by Hilton Hotel and the Fresno Convention & Entertainment Center Launch UC ANRs 2025-2040 strategic visioning process Facilitate networking and engagement with colleagues new and old Share Research and Extension best practices Illustrate career d...
View Site
Oaks and Sky
Site

8th California Oak Symposium

Oct. 31-Nov. 3, 2022 Embassy Suites, San Luis Obispo, California Symposium participants: Listened to science based talks from leaders in academia, industry and agencies. Viewed thought provoking abstracts and posters from colleagues.
View Site
Close up image of wheat in a field with a person's hand brushing the tops.
Site

UC ANR Policy Institute

Welcome to the new UC ANR Policy InstituteThe UC ANR Policy Institute was established in 2025, we are the one-stop shop for policymakers to find and easily access scientists and cutting-edge research on issues critical to California. The Policy Institute connects affiliated researchers across specialty areas…
View Site
Olives
Site

Advances in Walnut Production Short Course

November 5-7, 2018 Activities and Recreation Center Ballroom UC Davis Plan to join us for this integrated orchard management short course featuring UC faculty, Cooperative Extension specialists and farm advisors, and USDA researchers who will provide an in-depth, comprehensive study of all phases of...
View Site
Site

Almond Short Course

This integrated orchard management short course featured UC faculty, Cooperative Extension specialists and farm advisors, and researchers who provided an in-depth, comprehensive study of all phases of Almond production.
View Site
Youth doing science
Site

UC Science Connect

 Increasing Public Engagement and Confidence In ScienceUC Science Connect is a public‑facing resource to increase engagement with, and confidence in, science across California’s diverse communities. Rather than focusing only on individual scientific literacy and mastery of science facts or skills, we…
View Site
Main page image - major livestock species
Site - Advisor Program

UCCE Livestock Antimicrobial Stewardship

Welcome to the Livestock Antimicrobial Stewardship ProgramHealthy animals support healthy food, healthy families, and a healthy planet. Through the responsible use of antibiotics on farms, we help protect the animals we care for, maintain a safe food supply, and reduce the risk of antibiotic resistance that…
View Site

UC Riverside - Citrus Day, February 20

January 28, 2026
By Ben A Faber
UC Riverside Citrus Field Day for Growers & Industry Members February 19, 20269:00 AM-3:00 PM1060 Martin Luther King BlvdRiverside, CA 92507 Registration Fee: $50 per personRegistration fee includes lunch. Online registration is open through February 16, 2026.Location and Parking…
View Article
Event Primary Image
Siskiyou County 4-H Presentation & Home Ec Day
UCCE Siskiyou: Event

Siskiyou County 4-H Presentation & Home Ec Day

Event Date
Feb 28, 2026

 2026 Home Ec and Presentation Day February 28, 2026 held in Gazelle, CA. It is not required that you participate, but it is a great opportunity for each member to expand their communication skills for the future and enter any Home Ec projects they have been working on.  Registration is due no…
UCCE Siskiyou
View Event
Event Primary Image
Flyer for Laguna De Santa Rosa Mediterranean Oak Borer workshop
Mendocino County: Event

Laguna de Santa Rosa Mediterranean Oak Borer Workshop

Event Date
Mar 11, 2026

Join us at the Laguna de Santa Rosa Foundation to learn about the biology, ecology, and best management practices for the Mediterranean oak borer, an invasive pest of valley, blue, and Oregon white oaks.This event is intended for tree care professionals, parks managers, UC Master Gardeners, and community…
Mendocino County
View Event
Primary Image
avocado flower stages

Avocado Pollination Workshop

January 28, 2026
By Ben A Faber
Hear All the Buzz About Avocado Pollination from the Best in the Orchard California Avocado Growers Seminars Series 2026 Our Next Seminar February 10 (9 AM - 11 AM) PollinationFeaturing a talk by Inaki Hormaza(Professor at the Insituto de Hortofrucultura Subtropical…
View Article
Primary Image
Galls created by gall wasps add interest to the bare branches of this oak in winter. J.C. Lawrence.
The Real Dirt: Article

Look Up!

January 27, 2026
The winter months bring us a special opportunity: it is to look up, with wonder, at all the trees that have shed last year’s leaves. This is perhaps especially true in Chico, an official City of Trees. Chico shares that distinction with a number of other cities in California that are known for the quantity…
View Article
Event Primary Image
Sustainable Gardening For Native Plants - Brea
UC Master Gardeners of Orange County: Event

Sustainable Gardening For Native Plants - Brea

Event Date
Feb 27, 2026

Master Gardeners will teach you how to create a sustainable garden that enhances the environment, manages water use, and employs safe, science-based practices and integrated pest management using native plants. Registration Required  
UC Master Gardeners of Orange County
View Event
Event Primary Image
Tomatoes A to Z - Irvine
UC Master Gardeners of Orange County: Event

Tomatoes A to Z - Irvine

Event Date
Feb 25, 2026

You could plant from dawn to dusk and still not plant every variety of tomato! Whether you are a novice or a pro, you’ll enjoy learning about tomatoes: their history and some fun facts, the many varieties, their culture, diseases and pests, growing in the ground vs. growing in containers – and finally,…
UC Master Gardeners of Orange County
View Event
Event Primary Image
Seed Starting - Fullerton
UC Master Gardeners of Orange County: Event

Seed Starting - Fullerton

Event Date
Feb 25, 2026

Propagation of plants can be a gardener’s super power. But it can also mean lots of struggles. Come and learn ways that you too can be successful when it comes to starting seeds. Learn how to read a seed packet to optimize your harvest. Identify the tools you need and learn how to repurpose things you…
UC Master Gardeners of Orange County
View Event
Event Primary Image
Soil-The Foundation of Your Garden - Laguna Woods
UC Master Gardeners of Orange County: Event

Soil-The Foundation of Your Garden - Laguna Woods

Event Date
Feb 24, 2026

Good soil is the starting place for a great garden.  Learn what comprises healthy soil, about soil texture and structure, and how to protect, improve, and nurture soil. In this presentation, UC Master Gardeners of Orange County will discuss soil testing, aeration, and drainage. You’ll also learn…
UC Master Gardeners of Orange County
View Event
Event Primary Image
Orchid Basics - Laguna Niguel
UC Master Gardeners of Orange County: Event

Orchid Basics - Laguna Niguel

Event Date
Feb 23, 2026

UC Master Gardeners of Orange County will walk you through the basics of growing orchids, including plant selection, structure and characteristics, plus care and feeding. With thousands of species growing worldwide, there are sure to be orchids that you can grow successfully, and we will show you how.No…
UC Master Gardeners of Orange County
View Event