UCCE Livestock Antimicrobial Stewardship

Lessons Learnt

 

A Natural Solution for California's Herds: African Catfish Peptides

California's cattle producers and agricultural communities are all too familiar with the rising challenge of antibiotic resistance, making common bacterial infections harder to treat in livestock. But imagine a future where we could tackle these infections with a natural, powerful alternative. Our research points to just that: antimicrobial peptides (AMPs) found in African catfish.

We're really excited about these peptides because African catfish thrive in pathogen-rich freshwater, naturally producing these robust immune compounds in their skin mucus as a defense. This natural origin makes them highly appealing alternatives to synthetic drugs.

Predicted Safety and Potent Action

One of the most compelling aspects of these AMPs is their predicted safety for mammals. Our initial computer analyses suggest that various catfish AMPs are generally recognized as safe (GRAS). We predict they'll be absorbed in the human intestine without causing liver, brain, or heart toxicity. Furthermore, lab tests on a promising peptide, NACAP-II, confirmed it was non-hemolytic, meaning it didn't damage rabbit red blood cells—a strong indicator of its potential safety for mammalian cells.

Beyond safety, these peptides demonstrate effectiveness against problematic bacteria. One study revealed NACAP-II's strong activity against Extended-Spectrum Beta-Lactamase (ESBL)-producing Escherichia coli—a critical concern for both animal and human health due to its resistance to many common antibiotics. Another peptide, ACAP-IV, also showed antibacterial activity against E. coli and Staphylococcus aureus. We believe these AMPs work by directly disrupting bacterial cell membranes, a mechanism that makes it harder for bacteria to develop resistance compared to how they resist traditional antibiotics.

 

The Path Forward

While these findings are very promising, we want to emphasize that this research is still in its early, laboratory stages. A key challenge we've identified is that some of these peptides have a high molecular weight, which might hinder their absorption if given orally. This means our future work will need to explore advanced delivery methods, potentially involving nanotechnology, or modify the peptides for better absorption and accumulation where they're needed most. Ultimately, more studies are essential to confirm their effectiveness and safety in living animals, such as cattle, and to develop strategies for large-scale production.

 

From Our Lab to Your Farm: Smarter Strategies for Antimicrobial Resistance

As fellow researchers who have been studying antimicrobial resistance (AMR) in California dairy cattle, we want to share some important insights from our recent work. Our studies highlight that while we don't focus on new types of drugs to replace antibiotics, the most critical "alternative" is actually smarter, more targeted management and a deep understanding of pathogen behavior on your farm. This approach aims to reduce the need for antibiotics or minimize the development and spread of resistance when antibiotics are necessary.

Identification, Synthesis, and In Vitro Activities of Antimicrobial Peptide from African Catfish against the Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli

 

 

 

Tackling Resistant Salmonella in Cull Cows

First, we've found that Salmonella in cull dairy cows, which contribute to the ground beef supply, often carries resistance to important antimicrobials like tetracyclines, ampicillin, and even ceftriaxone—a drug critical for human medicine. This is definitely a concern for public health. Our research shows that certain cow-level factors, such as prior antimicrobial treatment or culling due to lameness, are associated with higher odds of isolating resistant Salmonella. Conversely, culling a cow due to low milk production was associated with lower odds of resistance.

 

At the herd level, factors like the number of milking cows and monthly culling rates can also influence the presence of resistant Salmonella. This suggests that improving timely culling decisions—removing cows with mild disease problems before they escalate and require extensive antimicrobial therapy—could be an economical way to reduce the selection pressure for AMR. We also need to investigate specific reasons for culling, especially lameness, to understand its link to resistance.

 

Unpacking Mastitis: The Importance of Specificity

Second, regarding mastitis, we've extensively characterized Coagulase-negative Staphylococcus (CNS) species, which are the most common cause of intra-mammary infections (IMI). Historically, these have often been grouped into one class for convenience, or sometimes left untreated. However, our findings reveal a diverse range of different CNS species circulating on US dairies, with Staphylococcus chromogenes and Staphylococcus haemolyticus being the most prevalent. We've seen evidence of persistent subclinical infections, especially with S. chromogenes and S. simulans, where identical strains were isolated from the same udder quarter over consecutive sampling stages.

 

Our message here is that a better understanding of these specific CNS species and their genetic diversity is crucial for improved management and treatment outcomes. Instead of blanket approaches, identifying the predominant species on your farm can guide species-specific control strategies, including targeted treatment decisions to eliminate persistent infections and improvements in milking practices like teat dipping. This precise identification, perhaps through rapid and low-cost diagnostic tests, is a key step to managing mastitis effectively while minimizing broad-spectrum antibiotic use. The low number of clinical mastitis cases from CNS suggests they mainly cause subclinical chronic infections, reinforcing the need for targeted strategies.

 

Calves and Antibiotic Use: A Clear Connection

Finally, our work with pre-weaned dairy calves shows a direct link between antibiotic use and the rise of resistance. We observed that administering ceftiofur as a systemic injection or feeding neomycin-supplemented milk replacer to calves leads to an increased concentration of resistant Enterobacteriaceae in their feces. The peak of ceftiofur resistance occurred around three to four days after treatment, with levels decreasing to below pre-treatment levels by seven to eight days post-treatment. Similarly, neomycin resistance increased during administration and then decreased once the antibiotic was discontinued.

 

This clearly illustrates that AMR is acquired during treatment and can be lost when antimicrobial pressure is removed. This finding strongly supports the importance of prudent antimicrobial stewardship. While antibiotics are sometimes necessary, minimizing their use, especially extra-label use or prophylactic feeding where not strictly justified, can help preserve their effectiveness for when they are truly needed. Initial resistance observed in calves might also be linked to residual antibiotics in colostrum or environmental bacteria ingested by the calves.

 

The Real "Alternatives" are Smart Choices

In summary, the "alternatives" we emphasize aren't necessarily new medications, but rather strategic management decisions. This includes timely culling, species-specific diagnostics for mastitis, and responsible, prudent use of antibiotics in calves, all aimed at reducing the overall selection pressure for antimicrobial resistance on your dairy.

 

What specific management practices are you currently implementing to address antibiotic resistance on your farm?

 

Based on

  1. Molecular epidemiology of coagulase-negative Staphylococcus species isolated at different lactation stages from dairy cattle in the United States
  2. Association between herd management practices and antimicrobial resistance in Salmonella spp. from cull dairy cattle in Central California
  3. Estimating the Rates of Acquisition and loss of Resistance of Enterobacteriaceae to Antimicrobial Drugs in Pre-Weaned Dairy Calves

Our Research: Guiding California Dairies in the Fight Against Antimicrobial Resistance

As California dairy owners and farmers, our research provides crucial insights into managing antimicrobial resistance (AMR) on our operations. We want to emphasize the importance of judicious antibiotic use and strong stewardship practices to maintain herd health and preserve the effectiveness of these vital medicines.

Understanding Resistance Patterns in Your Herd

Our findings reveal important patterns of antimicrobial resistance in common bacteria (Escherichia coli and Enterococcus/Streptococcus spp.) found in the fecal samples of adult dairy cows across California. We observed very low resistance to several drugs commonly given to adult dairy cows, such as cephalosporins and penicillins. This tells us that these particular drugs remain effective when used appropriately.

However, we detected higher rates of AMR to drugs that aren't approved for use in lactating dairy cattle over months of age, including florfenicol, tildipirosin, tilmicosin, and tiamulin. The high resistance to florfenicol, for instance—a drug typically used in beef cattle or non-lactating dairy cattle and calves—might be linked to co-selection with other resistance genes or how resistance spreads between bacteria. These results truly underscore the importance of sticking to labeled drug uses and understanding how resistance can develop even to drugs not directly used in adult lactating cows.

Regional Differences and Management Impacts

We also identified significant differences in AMR across California's dairy regions and seasons. For instance, E. coli isolates from Northern California showed lower resistance to certain antibiotics like ceftiofur compared to the Northern San Joaquin Valley and Greater Southern California. We believe this difference is related to regional variations in management practices and how antibiotics are used, especially for mastitis prevention and treatment. It's noteworthy that some dairies in Northern California didn't use antibiotics for mastitis treatment or prevention, which contributed to lower AMR in those areas. This really suggests that management practices that reduce the overall need for antibiotic treatments can play a significant role in bringing down AMR. The seasonal variations we observed, with higher resistance often seen in winter for E. coli isolates, could be attributed to weather conditions that favor bacterial growth and increase disease, potentially leading to more antibiotic use.

The Dynamics of Antibiotic Treatment and Resistance

Our in-depth study on the dynamics of ceftiofur resistance further highlights the impact of antibiotic treatments. We found that while systemic ceftiofur treatment leads to a rapid increase in resistant Enterobacteriaceae, these levels typically return to pre-treatment baselines within a few days. However, populations of sensitive bacteria can remain suppressed for a longer period. We even observed a cyclical re-emergence of resistance, though at diminishing levels, possibly due to complex interactions within the gut bacteria. These dynamics are critical for us to consider for future AMR surveillance and when designing treatment strategies.

The Path Forward: Stewardship and Smart Choices

In summary, our research emphasizes that while we weren't focused on entirely new non-antibiotic products, the most important "alternative" approach to combating AMR on our dairies is through robust antibiotic stewardship and judicious use. This means making informed decisions in consultation with your veterinarians, selecting antibiotics based on known resistance patterns, adhering strictly to approved drug labels and treatment protocols, and, crucially, implementing best management practices that reduce the incidence of diseases requiring antibiotic intervention in the first place. By doing so, we can help ensure that the antibiotics we rely on for animal health remain effective for generations to come.

 

 

Fair 2025
Site

4-H in San Mateo & San Francisco Counties

The University of California 4-H Youth Development Program serves youth and teens in 57 of 58 California counties through traditional clubs, after-school programs, state-wide leadership conferences and camps. As the largest, non-profit youth organization in the country, 4-H has a proven history of making…
View Site
Carrots in persons hand
Site - Statewide Program

UC Master Gardener Program

Welcome to the UC Master Gardener community! Since 1980, the UC Master Gardener Program has helped deliver the University of California's pioneering research directly into the hands of those who share a passion for gardening and environmental stewardship.
View Site
Forest and mountains
Site

Sierra Cascade Intensive Forest Management Research Cooperative

The mission of the Sierra Cascade Intensive Research Co-Op is to conduct applied reforestation and young stand management research from seed collection to the first commercial thinning focusing on intensive silviculture of conifer species and how they interact with their biotic and abiotic environme...
View Site
Site

Fleet Operations

ANR uses various types of vehicles in its daily operations. These vehicles may be University-owned, leased, provided by our County partners, or acquired through the Federal Excess Property Program.
View Site
header.png
Site - Statewide Program

California Project Learning Tree

Newsletter Sign Up Visit Our Twitter Page for More Current News Project Learning Tree uses trees and forests as windows on the world to increase students understanding of the environment and actions they can take to conserve it.
View Site
Green hills
Site

Hilgardia

Hilgardia was the primary technical publication of University of California Division of Agriculture and Natural Resources for 70 years, published from 1925 to 1995. Now digitized, the information in Hilgardia is freely available to scholarly and lay readers.
View Site
Strawberries
Site

Strawberry Disorders: Identification & Management

This bi-lingual UC website is designed to help growers and pest control advisors identify chemical injury as well as physical and physiological disorders associated with strawberry production. Illustrations and photographs depict disorders found in strawberry production fields.
View Site
header image
Site

Agriculture Ombudsperson

The Agricultural Ombudsperson is here to help agricultural producers navigate the permitting process, and facilitate meetings between the different county, state and federal agencies. The fact sheets outline regulatory requirements for the specified activity.
View Site
Event Primary Image
 handful of Soil
UC Master Gardeners of Fresno County: Event

Unlock the Secrets in the Soil

Event Date
Jun 6, 2026

UNLOCK THE SECRETS IN THE SOIL MG TIM  New advances in soil health have been made and are available to the home gardener.  A healthy garden starts with healthy soil. This class will focus on the USDA program "Unlock the Secrets in the Soil". The four fundamentals of the program and new…
UC Master Gardeners of Fresno County
View Event
Event Primary Image
Gardening into the future
UC Master Gardener Program of Sonoma County: Event

Gardening into the Future: Climate Adaptation in Your Yard

Event Date
May 2, 2026

There are positive, impactful actions you can take in your own garden and community to adapt to climate change. This talk offers concrete, achievable, science-based means to use in your own garden for carbon sequestration, food security, plant and animal habitat, and increased resilience in extreme…
UC Master Gardener Program of Sonoma County
View Event
Event Primary Image
invasive pest
UC Master Gardeners of Fresno County: Event

Trouble in Paradise

Event Date
May 30, 2026

Gardens are coming back to life with promises of glorious blooms and luscious veggies. Let’s talk about those pesky garden pests – what they are and how to control them. Learn which critters cause problems and which are beneficial. SATURDAY, MAY 30, 2026 10-11:30 AM CLOVIS BOTANICAL GARDEN 945 N…
UC Master Gardeners of Fresno County
View Event
Event Primary Image
Spring in the Garden
UC Master Gardener Program of Sonoma County: Event

Spring in the Garden

Event Date
Apr 11, 2026

Experienced Master Gardeners will provide valuable information and critical resources as you begin to build your gardening skills. Providing fresh vegetables for your family and enriching your garden with perennials that feed pollinators can bring great change to your garden environment. Knowing where to…
UC Master Gardener Program of Sonoma County
View Event
Event Primary Image
Botanical body scrubs
UC Master Gardeners of Fresno County: Event

Botanical Beauty: Creating Body Scrubs

Event Date
May 6, 2026

Learn how to create luxurious body scrubs using home-grown botanicals. This session covers selecting and blending herbs, flowers, and fruits for skin-nourishing benefits, exploring a range of exfoliation and moisturizing options, and customizing scents and textures to suit individual skin needs.
UC Master Gardeners of Fresno County
View Event
UC Master Gardeners of Tulare and Kings County: Article

Can You Dig It? Save Your Back by Using Your Head?

March 28, 2026
Gardeners often enthusiastically start new projects that require digging without considering whether they have the correct tools or techniques to start the  project. Digging doesn't have to be hard on your body if a gardener takes the time to match the tools to the job and practice proper digging…
View Article
UC Master Gardener Program of Alameda County: Event

Waterwise Gardening Talk (Oakland)

Event Date
Apr 18, 2026

Calculating plant water requirements, managing soil quality, using the right types of watering methods and gardening practices can greatly reduce the amount of water used in a vegetable garden. All of these issues will be addressed in this talk as well as vegetable plant selection for low water use.
UC Master Gardener Program of Alameda County
View Event
Primary Image
Crane fly. (Photo by Kathy Keatley Garvey)

They Don't Eat Mosquitoes

March 27, 2026
By Kathy Keatley Garvey
 Some folks call them "Mosquito Hawks" or "Daddy Long Legs" or "Skeeter Eaters."  They're not hawks, they're not arachnids, and they don't eat mosquitoes.They are crane flies, members of the family Tipulidae of the order Diptera (flies). With the temperatures rising, they're everywhere now,…
View Article
Primary Image
water
Stanislaus County: Article

Evapotranspiration Water Use Report 03/27/26

March 27, 2026
By Yolanda Cruz
Please find the attached document to provide the previous week’s estimated water use report in terms of evapotranspiration for almonds, peaches, walnuts, established vineyard, alfalfa, and pasture in Stanislaus County. This report may be used as a guide in your irrigation schedule for the…
View Article