A Natural Solution for California's Herds: African Catfish Peptides

California's cattle producers and agricultural communities are all too familiar with the rising challenge of antibiotic resistance, making common bacterial infections harder to treat in livestock. But imagine a future where we could tackle these infections with a natural, powerful alternative. Our research points to just that: antimicrobial peptides (AMPs) found in African catfish.

We're really excited about these peptides because African catfish thrive in pathogen-rich freshwater, naturally producing these robust immune compounds in their skin mucus as a defense. This natural origin makes them highly appealing alternatives to synthetic drugs.

Predicted Safety and Potent Action

One of the most compelling aspects of these AMPs is their predicted safety for mammals. Our initial computer analyses suggest that various catfish AMPs are generally recognized as safe (GRAS). We predict they'll be absorbed in the human intestine without causing liver, brain, or heart toxicity. Furthermore, lab tests on a promising peptide, NACAP-II, confirmed it was non-hemolytic, meaning it didn't damage rabbit red blood cells—a strong indicator of its potential safety for mammalian cells.

Beyond safety, these peptides demonstrate effectiveness against problematic bacteria. One study revealed NACAP-II's strong activity against Extended-Spectrum Beta-Lactamase (ESBL)-producing Escherichia coli—a critical concern for both animal and human health due to its resistance to many common antibiotics. Another peptide, ACAP-IV, also showed antibacterial activity against E. coli and Staphylococcus aureus. We believe these AMPs work by directly disrupting bacterial cell membranes, a mechanism that makes it harder for bacteria to develop resistance compared to how they resist traditional antibiotics.

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mSim

Home Download Tutorials Publications Links Overview The mSim toolbox is a suite of Matlab functions which are primarily used to simulate Non Point Source Pollution in Groundwater aquifers based on Finite element methods.
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mSim

Home Download Tutorials Publications Links We are currently migrating the tutorials to a new site. However this is still in progress...
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URFcomputation

Home Download Tutorials Publications Links In the previous step we computed 32 streamlines for each domestic well and 100 steamlines for each irrigation well. The following line will load the streamline data. However if you continue from the previous tutorial you can skip this.
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Predictionphase

Home Download Tutorials Publications Links Prediction Phase Prepare loading functions Convolution The computation of URFs concludes the construction phase of NPSAT. Now we can use the URFs to make prediction for any given loading function.
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Links

Home Download Tutorials Publications Links List of links related to mSim...
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Tutorial: Complete NPSAT example

Home Download Tutorials Publications Links Contents Problem Definition Flow Simulation Particle Tracking Unit Response Function computation Forward Implementation - Prediction phase This tutorial contains all the steps involved in the NPSAT construction and implementation phase.
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Tutorial: Particle tracking

Home Download Tutorials Publications Links This example is used to show how to run the particle tracking function. In addition we will compare the times between the 3 different options, 1) Serial in Matlab, 2) Vectorized in Matlab and 3) serial by calling the c++ version of the particle tracking.
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Download

Home Download Tutorials Publications Links The code is now hosted on Bitbucket For installation instructions see here...
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Tutorial: 1D ADE transport simulation

Home Download Tutorials Publications Links Problem definition Constant transport parameters, no decay, no retardation Constant transport parameters, with decay and retardation Variable transport parameters The domain of the problem will be 5 km long.
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